Table 3.
List of identified miRNAs having different expression in at least two comparisons
| LSWFvs. BSWF |
LLWFvs. BLWF |
LSYFvs. BSYF |
||||||
|---|---|---|---|---|---|---|---|---|
| miR Name | Up/Down | Expression Level | Fold | P Value | Fold | P Value | Fold | P Value |
| aca-miR-10c-3p | up | M | 1.93 | ** | 2.32 | ** | ||
| aca-miR-31-5p | up | M | 2.53 | * | 3.14 | *** | ||
| bta-miR-342 | down | M | 0.04 | * | -inf | * | ||
| bta-miR-652 | uncertain | L | inf | *** | 0.10 | ** | ||
| chi-miR-16b-5p | down | M | 0.12 | * | 0.25 | * | ||
| csa-let-7d | down | H | 0.51 | ** | 0.55 | ** | ||
| gga-let-7 g-5p | up | H | 1.48 | ** | 1.85 | ** | ||
| gga-miR-100-3p | down | M | 0.46 | * | 0.10 | * | ||
| gga-miR-130a-5p | up | M | 2.21 | ** | 7.16 | * | 3.38 | *** |
| gga-miR-1329-3p | up | M | 2.11 | * | 2.76 | ** | ||
| gga-miR-140-5p | up | H | 1.85 | * | 2.40 | *** | 1.46 | ** |
| gga-miR-1416-3p | up | M | 2.61 | ** | 2.19 | ** | 5.50 | *** |
| gga-miR-1451-5p | down | H | 0.70 | * | 0.72 | * | ||
| gga-miR-146a-5p | down | H | 0.50 | ** | 0.50 | ** | ||
| gga-miR-153-3p | down | M | 0.58 | * | 0.40 | * | ||
| gga-miR-15b-5p | down | M | 0.47 | * | 0.40 | * | ||
| gga-miR-15c-5p | down | M | 0.30 | ** | 0.22 | ** | ||
| gga-miR-1677-3p | down | M | 0.50 | *** | 0.17 | * | ||
| gga-miR-183 | down | M | 0.45 | * | 0.38 | ** | ||
| gga-miR-187-5p | up | M | 2.46 | * | 2.71 | * | ||
| gga-miR-1a-3p | up | H | 2.95 | * | 1.94 | ** | ||
| gga-miR-200b-3p | up | H | 2.13 | ** | 1.63 | ** | ||
| gga-miR-200b-5p | up | M | 2.16 | *** | 2.06 | *** | ||
| gga-miR-221-3p | up | H | 1.94 | ** | 2.23 | *** | ||
| gga-miR-26a-3p | up | M | 1.92 | ** | 1.47 | ** | ||
| gga-miR-301a-5p | up | M | 4.02 | ** | 5.97 | * | ||
| gga-mir-3535-p3 | down | M | 0.22 | * | 0.32 | ** | ||
| gga-miR-455-3p | down | M | 0.52 | *** | 0.50 | *** | ||
| gga-miR-460b-5p | up | M | 2.45 | ** | 1.91 | * | ||
| hsa-miR-16-5p | down | M | 0.17 | ** | 0.19 | ** | ||
| hsa-miR-338-5p | up | M | 1.65 | * | 1.75 | ** | ||
| mmu-miR-145a-3p | up | H | 1.61 | * | 1.53 | * | ||
| mmu-miR-143-5p | up | H | 1.69 | *** | 1.95 | * | 1.68 | * |
| oha-miR-1d-3p | up | M | 8.31 | * | 12.31 | ** | 8.97 | ** |
| tgu-miR-125-5p | up | H | 1.34 | * | 1.65 | * | ||
| tgu-miR-139-5p | down | M | 0.55 | * | 2.75 | ** | ||
| tgu-miR-454-5p | up | M | 2.37 | ** | 5.44 | * | ||
| novel-miR-116 | down | M | 0.04 | ** | 0.02 | * | ||
| novel-miR-126 | down | M | 0.02 | *** | 0.03 | ** | ||
| novel-miR-13 | up | M | 1.57 | ** | 2.53 | * | ||
| novel-miR-146 | down | M | 0.01 | * | 0.02 | ** | ||
| novel-miR-158 | up | M | inf | * | inf | ** | ||
| novel-miR-47 | down | M | 0.49 | ** | 0.14 | * | ||
| novel-miR-62 | down | M | 0.12 | * | 0.29 | * | ||
| novel-miR-93 | down | M | 0.01 | * | -inf | * | 0.10 | * |
M, middle; L, low; H, high; inf, norm average of reads in brooding follicles is too low to be detected; -inf, norm average of reads in laying follicles is too low to be detected.
The P values were calculated by t-test.
*
P < 0.1,
**
P < 0.05 and
***
P < 0.001.