Table 2.
Microarray results and description of genes selected for further analysis
Microarray results | |||||
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Persistently HPV16-infected versus HPV-negative women | |||||
Gene symbol | Chromosome | Gene description | Gene ontology | T-test (p-value) | Ratio of means1 |
TMEM45A | 3q12.2 | Transmembrane protein 45A | Integral to membrane | < 0.0001 | 3.63 |
TNFAIP6 | 2q23.2 | Tumor necrosis factor, alpha-induced protein 6 | Inflammatory response, cell adhesion, signal transduction, cell-cell signaling | < 0.0001 | 0.05 |
CD44 | 11p13 | CD44 antigen (homing function and Indian blood group system) | Regulation of cell growth, inflammatory response, cell adhesion, cell migration | < 0.0001 | 0.14 |
CCRL2 | 3p21 | Chemokine (C-C motif) receptor-like 2 | Chemotaxis, signal transduction, receptor activity | < 0.00001 | 0.04 |
p16INK4a2 | 9p21 | Cyclin-dependent kinase inhibitor 2A | Cell cycle checkpoint, regulation of cyclin-dependent protein kinase activity, G1/S transition of mitotic cell cycle, DNA fragmentation involved in apoptosis, transcription | 0.5193 | 0.93 |
SERPINB52 | 18q21.3 | Serpin peptidase inhibitor, clade B (ovalbumin), member 5 | Cell motion, serine-type endopeptidase inhibitor activity, protein binding | 0.0144 | 2.69 |
Ratio of means was computed as “mean expression value in persistently HPV16-infected women”/“mean expression value in HPV-negative women”;
Included in analysis based on à priori hypotheses.