Table 2.
Primer name | Sequence (5′–3′)a |
---|---|
i5+V3 | AATGATACGGCGACCACCGAGATCTACAC ATCGTACGTATGGTAATTCAATTACCGCGGCTGCTGG |
i7+V1 | CAAGCAGAAGACGGCATACGAGAT AACTCTCGAGTCAGTCAGCCGAGTTTGATCMTGGCTCAG |
For.seq.V3 | TATGGTAATTCAATTACCGCGGCTGCTGG |
Rev.seq.V1 | AGTCAGTCAGCCGAGTTTGATCMTGGCTCAG |
Index.V1 | CTGAGCCAKGATCAAACTCGGCTGACTGACT |
aIllumina’s MiSeq adaptor sequences are in bold. Underlined portion denotes the barcode region. Barcodes used in this study are from the Schloss laboratory’s MiSeq SOP (http://www.mothur.org/wiki/MiSeq_SOP; [2]). Italics denotes the V1 or V3 16S rRNA gene primer [11]