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. 2016 Aug 2;11(8):e0159905. doi: 10.1371/journal.pone.0159905

Table 1. Differentially expressed miRNAs in the FPR and SPR libraries of S. miltiorrhiza.

miR_name Mature Sequence(5'-3') FPR_RPM SPR_RPM log2(SP/FP) Pvalue
smi-miR156a-1 TGACAGAAGAGAGTGAGCAC 8.54 24.85 1.540938 6E-11
smi-miR156a-2 TGACAGAAGAGAGTGAGCAC 8.54 24.85 1.540938 6E-11
smi-miR156a-3 TGACAGAAGAGAGTGAGCAC 8.54 24.85 1.540938 6E-11
smi-miR159a TTTGGATTGAAGGGAGCTCTA 691.88 2714.23 1.971949 0
aly-miR159b-3p-like TTTGGATTGAAGGGAGCTCTT 0.81 58.91 6.184447 3.05E-93
pab-miR160a-like TGCCTGGCTCCCTGTATGCCA 0.01 2.79 8.124121 9.12E-06
smi-miR164a-1 TGGAGAAGCAGGGCACGTGCA 12.61 112.51 3.157413 8.1E-110
smi-miR164a-2 TGGAGAAGCAGGGCACGTGCA 12.61 112.51 3.157413 8.1E-110
ath-miR165a-3p-like TCGGACCAGGCTTCATCCCCC 2.31 6.7 1.536268 0.000636
smi-miR166a-3p-1 TCGGACCAGGCTTCATTCCCC 20432.21 47641.34 1.221369 0
smi-miR166a-3p-2 TCGGACCAGGCTTCATTCCCC 20432.21 47641.34 1.221369 0
smi-miR166a-3p-3 TCGGACCAGGCTTCATTCCCC 20432.21 47641.34 1.221369 0
smi-miR166a-3p-4 TCGGACCAGGCTTCATTCCCC 20432.21 47641.34 1.221369 0
smi-miR166a-5p-4 GGAATGTTGTTTGGCTCGAGG 10.85 4.19 -1.37267 0.000252
osa-miR166e-3p-like TCGAACCAGGCTTCATTCCCC 24.55 115.86 2.238588 8.35E-76
smi-miR166h-3p TCTCGGACCAGGCTTCATTCC 495.25 1758.58 1.828182 0
smi-miR166a-5p GGAATGTTGTCTGGCTCGAGG 99.81 33.5 -1.57502 6.67E-36
smi-miR167b-5p TGAAGCTGCCAGCATGATCTG 3.93 34.62 3.139005 8.75E-35
smi-miR168a-5p-1 TCGCTTGGTGCAGGTCGGGAA 39.06 200.73 2.361492 4.3E-139
smi-miR168a-5p-2 TCGCTTGGTGCAGGTCGGGAA 39.06 200.73 2.361492 4.3E-139
smi-miR171a-3p TGAGCCGAACCAATATCACTC 200.57 456.19 1.185529 1.8E-114
smi-miR319a-3p-1 TTGGACTGAAGGGAGCTCCC 166.39 424.36 1.35072 4.1E-131
smi-miR319a-3p-2 TTGGACTGAAGGGAGCTCCC 166.39 424.36 1.35072 4.1E-131
smi-miR319a-3p-3 TTGGACTGAAGGGAGCTCCC 166.39 424.36 1.35072 4.1E-131
smi-miR319a-3p-4 TTGGACTGAAGGGAGCTCCC 166.39 424.36 1.35072 4.1E-131
smi-miR319a-3p-5 TTGGACTGAAGGGAGCTCCC 166.39 424.36 1.35072 4.1E-131
smi-miR390a-5p-1 AAGCTCAGGAGGGATAGCGCC 3.25 8.1 1.317482 0.000892
smi-miR390a-5p-2 AAGCTCAGGAGGGATAGCGCC 3.25 8.1 1.317482 0.000892
smi-miR390a-5p-3 AAGCTCAGGAGGGATAGCGCC 3.25 8.1 1.317482 0.000892
smi-miR394a-5p-1 TTGGCATTCTGTCCACCTCC 7.87 16.75 1.089726 4.31E-05
smi-miR394a-5p-2 TTGGCATTCTGTCCACCTCC 7.87 16.75 1.089726 4.31E-05
smi-miR394a-5p-3 TTGGCATTCTGTCCACCTCC 7.87 16.75 1.089726 4.31E-05
smi-miR396b-5p-1 TTCCACAGCTTTCTTGAACTT 62.79 317.15 2.336559 1.3E-215
smi-miR396b-5p-2 TTCCACAGCTTTCTTGAACTT 62.79 317.15 2.336559 1.3E-215
smi-miR396a-5p TTCCACAGCTTTCTTGAACTG 1408.85 6879.65 2.287817 0
smi-miR396c-5p TTCCACAGCTTTCTTGAACTA 143.07 1340.36 3.227827 0
gma-miR396e-like TTCCACAGCTTTCTTGAACTGT 0.54 3.35 2.63313 0.000549
har-miR403a-like TTAGATTCACGCACAAACTCG 58.99 227.26 1.945801 1.2E-121
smi-miR482a TTTCCAACTCCACCCATTCCTA 24.55 222.79 3.18189 2.7E-217
smi-miR35832 GGTGCAATGGGCGAACGCCGAGG 50.85 15.36 -1.72707 2.13E-21
smi-miR35835 TTTCCAATGCCGCCCATACCGA 327.09 1715.59 2.390945 0