Table 1. Differentially expressed miRNAs in the FPR and SPR libraries of S. miltiorrhiza.
miR_name | Mature Sequence(5'-3') | FPR_RPM | SPR_RPM | log2(SP/FP) | Pvalue |
---|---|---|---|---|---|
smi-miR156a-1 | TGACAGAAGAGAGTGAGCAC | 8.54 | 24.85 | 1.540938 | 6E-11 |
smi-miR156a-2 | TGACAGAAGAGAGTGAGCAC | 8.54 | 24.85 | 1.540938 | 6E-11 |
smi-miR156a-3 | TGACAGAAGAGAGTGAGCAC | 8.54 | 24.85 | 1.540938 | 6E-11 |
smi-miR159a | TTTGGATTGAAGGGAGCTCTA | 691.88 | 2714.23 | 1.971949 | 0 |
aly-miR159b-3p-like | TTTGGATTGAAGGGAGCTCTT | 0.81 | 58.91 | 6.184447 | 3.05E-93 |
pab-miR160a-like | TGCCTGGCTCCCTGTATGCCA | 0.01 | 2.79 | 8.124121 | 9.12E-06 |
smi-miR164a-1 | TGGAGAAGCAGGGCACGTGCA | 12.61 | 112.51 | 3.157413 | 8.1E-110 |
smi-miR164a-2 | TGGAGAAGCAGGGCACGTGCA | 12.61 | 112.51 | 3.157413 | 8.1E-110 |
ath-miR165a-3p-like | TCGGACCAGGCTTCATCCCCC | 2.31 | 6.7 | 1.536268 | 0.000636 |
smi-miR166a-3p-1 | TCGGACCAGGCTTCATTCCCC | 20432.21 | 47641.34 | 1.221369 | 0 |
smi-miR166a-3p-2 | TCGGACCAGGCTTCATTCCCC | 20432.21 | 47641.34 | 1.221369 | 0 |
smi-miR166a-3p-3 | TCGGACCAGGCTTCATTCCCC | 20432.21 | 47641.34 | 1.221369 | 0 |
smi-miR166a-3p-4 | TCGGACCAGGCTTCATTCCCC | 20432.21 | 47641.34 | 1.221369 | 0 |
smi-miR166a-5p-4 | GGAATGTTGTTTGGCTCGAGG | 10.85 | 4.19 | -1.37267 | 0.000252 |
osa-miR166e-3p-like | TCGAACCAGGCTTCATTCCCC | 24.55 | 115.86 | 2.238588 | 8.35E-76 |
smi-miR166h-3p | TCTCGGACCAGGCTTCATTCC | 495.25 | 1758.58 | 1.828182 | 0 |
smi-miR166a-5p | GGAATGTTGTCTGGCTCGAGG | 99.81 | 33.5 | -1.57502 | 6.67E-36 |
smi-miR167b-5p | TGAAGCTGCCAGCATGATCTG | 3.93 | 34.62 | 3.139005 | 8.75E-35 |
smi-miR168a-5p-1 | TCGCTTGGTGCAGGTCGGGAA | 39.06 | 200.73 | 2.361492 | 4.3E-139 |
smi-miR168a-5p-2 | TCGCTTGGTGCAGGTCGGGAA | 39.06 | 200.73 | 2.361492 | 4.3E-139 |
smi-miR171a-3p | TGAGCCGAACCAATATCACTC | 200.57 | 456.19 | 1.185529 | 1.8E-114 |
smi-miR319a-3p-1 | TTGGACTGAAGGGAGCTCCC | 166.39 | 424.36 | 1.35072 | 4.1E-131 |
smi-miR319a-3p-2 | TTGGACTGAAGGGAGCTCCC | 166.39 | 424.36 | 1.35072 | 4.1E-131 |
smi-miR319a-3p-3 | TTGGACTGAAGGGAGCTCCC | 166.39 | 424.36 | 1.35072 | 4.1E-131 |
smi-miR319a-3p-4 | TTGGACTGAAGGGAGCTCCC | 166.39 | 424.36 | 1.35072 | 4.1E-131 |
smi-miR319a-3p-5 | TTGGACTGAAGGGAGCTCCC | 166.39 | 424.36 | 1.35072 | 4.1E-131 |
smi-miR390a-5p-1 | AAGCTCAGGAGGGATAGCGCC | 3.25 | 8.1 | 1.317482 | 0.000892 |
smi-miR390a-5p-2 | AAGCTCAGGAGGGATAGCGCC | 3.25 | 8.1 | 1.317482 | 0.000892 |
smi-miR390a-5p-3 | AAGCTCAGGAGGGATAGCGCC | 3.25 | 8.1 | 1.317482 | 0.000892 |
smi-miR394a-5p-1 | TTGGCATTCTGTCCACCTCC | 7.87 | 16.75 | 1.089726 | 4.31E-05 |
smi-miR394a-5p-2 | TTGGCATTCTGTCCACCTCC | 7.87 | 16.75 | 1.089726 | 4.31E-05 |
smi-miR394a-5p-3 | TTGGCATTCTGTCCACCTCC | 7.87 | 16.75 | 1.089726 | 4.31E-05 |
smi-miR396b-5p-1 | TTCCACAGCTTTCTTGAACTT | 62.79 | 317.15 | 2.336559 | 1.3E-215 |
smi-miR396b-5p-2 | TTCCACAGCTTTCTTGAACTT | 62.79 | 317.15 | 2.336559 | 1.3E-215 |
smi-miR396a-5p | TTCCACAGCTTTCTTGAACTG | 1408.85 | 6879.65 | 2.287817 | 0 |
smi-miR396c-5p | TTCCACAGCTTTCTTGAACTA | 143.07 | 1340.36 | 3.227827 | 0 |
gma-miR396e-like | TTCCACAGCTTTCTTGAACTGT | 0.54 | 3.35 | 2.63313 | 0.000549 |
har-miR403a-like | TTAGATTCACGCACAAACTCG | 58.99 | 227.26 | 1.945801 | 1.2E-121 |
smi-miR482a | TTTCCAACTCCACCCATTCCTA | 24.55 | 222.79 | 3.18189 | 2.7E-217 |
smi-miR35832 | GGTGCAATGGGCGAACGCCGAGG | 50.85 | 15.36 | -1.72707 | 2.13E-21 |
smi-miR35835 | TTTCCAATGCCGCCCATACCGA | 327.09 | 1715.59 | 2.390945 | 0 |