Table 1. Human ubiquitin ligase genes encoding RING-finger and transmembrane domains (C3H2C3 type).
Gene Name | Synonym | Upstream motif | Transmembrane | Protein length | |
---|---|---|---|---|---|
RNF130 | G1RZFP, GOLIATH, GP | −315 | UPRE | 2 | 419 |
RNF150 | KIAA1214 | 2 | 438 | ||
RNF149 | FLJ90504 | −2586 | ERSE-I | 1 | 400 |
RNF133 | 1 | 376 | |||
RNF128 | FLJ23516, GRAIL | 1 | 428 | ||
RNF122 | FLJ12526 | 1 | 155 | ||
RNF24 | G1L | 1 | 148 | ||
RNF13 | RZF | 1 | 381 | ||
RNF167 | DKFZP566H073 | 1 | 350 | ||
ZNRF4 | nixin, RNF204, sperizin, spzn, Ssrzf1 | 1 | 429 | ||
RNF43† | DKFZp781H0392, FLJ20315, URCC | 2 | 783 | ||
ZNRF3† | BK747E2.3, FLJ22057, KIAA1133, RNF203 | 1 | 936 | ||
SYVN1‡ | DER3, HRD1 | −506−2303 | ERSE-I | 6 | 617 |
AMFR | gp78, RNF45 | 5 | 643 | ||
RNF175§ | FLJ34190 | 5 | 328 | ||
RNF121§ | FLJ11099 | −2372 | UPRE | 6 | 327 |
RNF145‡ | FLJ31951 | −1258 | ERSE-II | 12 | 663 |
RNF139‡ | HRCA1, RCA1, TRC8 | 12 | 664 | ||
RNF103 | hkf-1, KF1 | 4 | 685 |
These lists are aligned with the relatedness from a multiple sequence alignment by CLUSTALW. The same gene families are grouped into the same symbol based on the TreeFam.