Table 1.
Information on the SlTPS, SlTPP, and SlTRE genes and proteins.
| Family | Genes | Loci in SOL | Accessions in GenBank | ORF (bp) | Protein size and domains | UniGenes in SOL/cDNAs in GenBank | ||
|---|---|---|---|---|---|---|---|---|
| size (aa) | TPS | TPP | ||||||
| TPS | SlTPS1 | Solyc01g005210 | XP_004228746 | 2574 | 857 | Yes | Yes | SGN-U574042, SGN-U600459, SGN-U574043 |
| SlTPS2 | Solyc02g071590 | XP_010316884 | 2832 | 943 | Yes | Yes | – | |
| SlTPS3 | Solyc02g072150 | XP_004233035 | 2556 | 851 | Yes | Yes | SGN-U575044, SGN-U575051, SGN-U575049 | |
| SlTPS4 | Solyc04g025940 | XP_004237260 | 2574 | 857 | Yes | Yes | SGN-U576714, SGN-U567013 | |
| SlTPS5 | Solyc05g005750 | XP_004238680 | 2556 | 851 | Yes | Yes | SGN-U576715 | |
| SlTPS6 | Solyc07g006500 | XP_010323144 | 2631 | 876 | Yes | Yes | SGN-U576716, AB368491 | |
| SlTPS7 | Solyc07g055300 | XP_004243268 | 2577 | 858 | Yes | Yes | SGN-U585228, SGN-U599997 | |
| SlTPS8 | Solyc07g062140 | NP_001234879 | 2781 | 926 | Yes | Yes | SGN-U579539, SGN-U580026, EF151131 | |
| SlTPS9 | Solyc08g076650 | XP_004245918 | 2589 | 862 | Yes | Yes | SGN-U583981 | |
| SlTPS10 | Solyc10g007950 | XP_004248198 | 2574 | 857 | Yes | Yes | SGN-U584220, SGN-U600516 | |
| SlTPS11a | Solyc10g046770 | XM_010329326 | 735 | 244 | – | Yes | – | |
| TPP | SlTPP1 | Solyc03g007290 | XP_004234173 | 1011 | 336 | No | Yes | – |
| SlTPP2 | Solyc03g083960 | XP_010317997 | 1104 | 367 | No | Yes | SGN-U584704, AK319855, AK247068, AK322638 | |
| SlTPP3 | Solyc04g054930 | XP_004237406 | 1167 | 388 | No | Yes | SGN-U570949, AK320358 | |
| SlTPP4 | Solyc04g072920 | XP_004237894 | 1098 | 365 | No | Yes | SGN-U575865, AK321917 | |
| SlTPP5 | Solyc04g082550 | XP_004238632 | 882 | 293 | No | Yes | – | |
| SlTPP6 | Solyc05g051880 | XP_010321465 | 1047 | 348 | No | Yes | – | |
| SlTPP7 | Solyc06g060600 | XP_004242008 | 1020 | 339 | No | Yes | – | |
| SlTPP8 | Solyc08g079060 | XP_004245739 | 1161 | 386 | No | Yes | SGN-U584816, SGN-U584817, SGN-U568331 | |
| TRE | SlTRE1 | Solyc08g082860 | XP_004245478 | 1746 | 581 | – | – | SGN-U568010, AK320041 |
athe predicted ORFs seems incomplete for intact proteins.