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. 2016 Aug 4;9:164. doi: 10.1186/s13068-016-0577-z

Table 1.

Primers used in the study (restriction sites represented in upper case)

Construct name (intermediate construct) Vector Forward primer (5’–3’) Reverse Primer (5’–3’) Linearized vector Primary PCR templatea Secondary PCR templatea
BglA-v (BglA) pET21a CTTTAAGAAGGAGATATACATATGGCTAGCcaccatcaccatcaccacaagataactttcccaaaaga ccatgtaggaacgagctttgtgccACTAGTCTGAGGAGTTGTTACAGTTGTgaaaccgttgtttttgattacttc pET28a BglA [32] pET21a
BglA-v pET21a ttacatACTAGTtctcataaatttatctatgg ttactaGAGCTCctattgttcttcaactggga pET9d
Xyn-docB [48]
BglA*-v (BglA*) pET21a CTTTAAGAAGGAGATATACATATGGCTAGCcaccatcaccatcaccacaagataactttcccaaaaga ccatgtaggaacgagctttgtgccACTAGTCTGAGGAGTTGTTACAGTTGTgaaaccgttgtttttgattacttc pET28a
BglA*
pET21a
BglA*-f pET21a CTTTAAGAAGGAGATATACATATGGCTAGCcaccatcaccatcaccacaagataactttcccaaaaga ccatgtaggaacgagctttgtgccACTAGTCTGAGGAGTTGTTACAGTTGTgaaaccgttgtttttgattacttc pET28a
BglA*
pET21a
Xyn10A-f [42]
BglA*-v pET21a ttacatACTAGTtctcataaatttatctatgg ttactaGAGCTCctattgttcttcaactggga pET9d
Xyn-docB [48]
8A-g (8A) pET28a ttacgtCCATGGgtgtgccttttaacacaaaata ttacgaGGTACCaatgaaggtgtcggattcga pET28a
Cel8A [29]
8A-g pET28a tactagGGTACCagaagaagcaaacaagggag ttactaCTCGAGcttacccagtaagccattct pET28a-g-5A [6]
8A*-g (8A*) pET28a ttacgtCCATGGgtgtgccttttaacacaaaata ttacgaGGTACCaatgaaggtgtcggattcga pET28a
8AQM [24]
8A*-g pET28a tactagGGTACCagaagaagcaaacaagggag ttactaCTCGAGcttacccagtaagccattct pET28a-g-5A [6]
8A*-b pET28a ttacgtCCATGGgtgtgccttttaacacaaaata ttacgaGGTACCaatgaaggtgtcggattcga pET28a
8A-b [29]
Scaf·GT pET9d GTTTAACTTTAAGAAGGAGATATAccatggtgcttcctccgaaaactacc ggtgtgtttgtcggtgtgtttgtcGGTACCgcttcttcctgagagacaatc pET28a
CBM-Coh2375 [34]
pET28a
Scaf·AT [49]
Scaf·GTV pET9d gttctttgacggtggagtaaatgttggagatacaacagtacctacaacacctacaacacctGCAGGGCAATTACAAATTGA CCTTTCGGGCTTTGTTAGCAGCCggatcctAATTTGAGCCAACCAATATAG pET28a CBM-CohC1
[48]
pET9d
Scaf·GT

aIndicates restriction-free cloning