Table 1. Criteria to differentiate Susceptible-Infectious-Recovered (SIR) dynamics, Susceptible-Infectious-Recovered-Susceptible (SIRS) dynamics, and Susceptible-Infectious-Latent- Infectious (SILI) dynamics in bats; strategies to predict the likelihood of spillover or to minimize the likelihood of spillover for viruses with each type of dynamics; and research that would improve our understanding of bat virus dynamics given each scenario†.
| Criterion | SIR | SIRS | SILI |
|---|---|---|---|
| Individuals have repeated pulses of excretion. | No | Yes | Yes |
| Virus genotype is the same in repeated pulses of excretion in individuals. | N/A | No* | Yes |
| Virus genotypes in multiple pulses of excretion in a population have shared ancestry. | No | Yes | Yes |
| Virus genotype is different in each population pulse. | Yes* | No prediction | No |
| Age-specific seroprevalence increases monotonically.** | Yes | Yes** | No** |
| Waves of infection travel among populations. | Yes | No prediction | No*** |
| Past infection increases the likelihood of present infection. Prevalence of infection among previously positive individuals is higher than among the population.**** | N/A | No | Yes |
| Information needed for prediction of pulses | Herd immunity within and among populations | Drivers of contact rates, especially environmental drivers | Drivers of stress, especially environmental drivers |
| Intervention strategies | |||
| Disperse bats | Movement of infectious or susceptible bats could spark epidemics elsewhere; local risk may be neutral or may decrease. | Stress of intervention may increase viral reactivation and shedding. | |
| Cull bats | No effect on risk of spillover if transmission is driven by local density of bats; decreased local risk if transmission is driven by population size. | Stress of intervention may increase viral reactivation and shedding. | |
| Research agenda | Monitor herd immunity and metapopulation structure. | Estimate rate of waning immunity; identify contact structure and factors that change contact rates. | Identify drivers of viral reactivation, especially environmental drivers of stress. |
†SIR, SIRS, and SILI dynamics may be poles on a continuum depending on the time spent in each host state (e.g., an SIRS disease with a long R duration may generate similar dynamics to an SIR disease) and the percentage of individuals that exhibit each dynamic (e.g., if most individuals recover but a few experience SILI dynamics).
*provided there is sufficient resolution in the genotyping.
**assuming antibodies are protective and that studies address multiple epidemics; seroprevalence increases monotonically with SIRS dynamics given particular parameter values.
***waves of invasion may occur for SILI if introduced into naïve connected populations.
**** assuming homogenous transmission dynamics.