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. 2016 Aug 5;11(8):e0160668. doi: 10.1371/journal.pone.0160668

Table 1. Prevalence of baseline HCV NS3/4A and NS5B polymorphisms.

Codon Reference (%) Variants Reference (%) Variants
≥1% (%) <1% ≥1% (%) <1%
NS3/4A HCV GT-1a (n = 229) HCV GT-1b (n = 1196)
61 T (93.0) A, A/T (4.4) - S (85.2)a T, S/T (7.4) A/S/T, A/T, C, N
S, S/T (2.6) A, A/S (4.5)
P, P/S (2.4)
80 Q (80.8) K, K/Q, K/N (17.5) R, L/Q, I/K/L/Q Q (96.5) L, L/Q (2.4) K, K/Q, L/M, R
155 R (99.1) - K R (100) - -
156 A (100) - - A (100) - -
168 D (100) - - D (99.0) E, D/E (1.0) -
344 T (99.1) - A/T, N T (67.3) I, I/T (20.8) I/V, D, D/V, D/I/N/V, A/I/T/V, A/S, I/M, I/M/T, N/S, N/T
V (6.9)
M, M/T (1.3)
S, S/T (1.2)
A, A/T (1.0)
NS5B HCV GT-1a (n = 292) HCV GT-1b (n = 1196)
421 A (79.5) V, A/V (20.2) E/V A (91.9) V, A/V (8.0) G, T
495 P (100) - - P (100) - -
496 P (100) - - P (99.5) - A, S, P/S
499 A (96.6) T (2.7) A/S, V V (78.5) A, A/V (14.8) T (5.5) A/T, I, I/V, L

Pooled data: 1241.2, 1241.7, SOUND-C1, -C2, and -C3, and HCVerso1 and 2 (all treatment arms).

aDenominator was 1195 due to one illegible sequence at NS3 codon 61.

GT, genotype; HCV, hepatitis C virus.