TABLE 1.
Comparison of the HEV isolate from the patient in the present study (HE-JVN1) with 104 human and swine HEV isolates of genotype 4 whose common 326- or 412-nt sequence in ORF1 or common 241- to 412-nt sequence in ORF2 is known
Country | Host | ORF1
|
ORF2
|
||||
---|---|---|---|---|---|---|---|
No. of isolates compared | nt length compared | Identity (%) | No. of isolates compared | nt length compared | Identity (%) | ||
China | Human | 2 | 412 | 87.4-89.8 | 22 | 301-412 | 83.4-94.0 |
Swine | 0 | -a | - | 5 | 300 | 85.3-96.3 | |
India | Swine | 0 | - | - | 12 | 241-263 | 85.4-88.7 |
Indonesia | Swine | 0 | - | - | 1 | 412 | 90.8 |
Japan | Human | 15 | 412 | 87.1-89.3 | 18 | 412 | 86.9-88.3 |
Swine | 2 | 412 | 88.1 | 10 | 412 | 87.1-87.9 | |
Taiwan | Human | 0 | - | - | 8 | 304-346 | 85.5-89.9 |
Swine | 0 | - | - | 3 | 304-346 | 87.2-90.5 | |
Vietnam | Human | 6 | 326 | 82.2-98.8 | 0 | - | - |
-, Not applicable.