Table 2. List of high confidence miRNA:target pairs.
| Novel miRNAs | Class | Target LOCs | Reads | Category | P-value | Target gene |
|---|---|---|---|---|---|---|
| n-001 | class-I | 03g57940.4 | 11 | 1 | 0.01 | CK1_CaseinKinase_1a 4 (Hd16) |
| n-028 | class-I | 05g02120.1 | 34 | 0 | 0.04 | Pectinacetylesterase domain containing protein |
| n-042 | class-II | 05g07030.2 | 38 | 0 | 0.02 | arginyl-tRNAsynthetase |
| n-046 | class-I | 05g41480.1 | 13 | 0 | 0.03 | DUF250 domain containing protein |
| n-098 | class-II | 08g38620.3 | 15 | 0 | 0.03 | expressed protein |
| 08g38620.3 | 24 | 0 | 0.02 | expressed protein | ||
| 08g38620.3 | 45 | 0 | 0.03 | expressed protein | ||
| 09g36320.1 | 85 | 0 | 0.03 | tyrosine protein kinase domain containing protein | ||
| n-102 | class-I | 08g38620.3 | 15 | 0 | 0.03 | expressed protein |
| 08g38620.3 | 24 | 0 | 0.02 | expressed protein | ||
| 08g38620.3 | 45 | 0 | 0.02 | expressed protein | ||
| n-137 | class-II | 07g09150.1 | 14 | 1 | 0.04 | expressed protein |
| n-156 | class-II | 02g52250.1 | 10 | 1 | 0.01 | SKIP/SNW domain containing protein |
| 06g48500.2 | 21 | 1 | 0.02 | expressed protein | ||
| n-173 | class-I | 04g19480.1 | 21 | 0 | 0.03 | retrotransposon protein |
| 05g43650.1 | 22 | 0 | 0.03 | expressed protein | ||
| 12g37510.1 | 23 | 0 | 0.04 | UDP-glucoronosyl and UDP-glucosyltransferase domain containing protein | ||
| 02g03750.1 | 25 | 0 | 0.01 | Polygalacturonase | ||
| 05g25890.1 | 27 | 0 | 0.03 | expressed protein | ||
| 09g30140.1 | 40 | 0 | 0.02 | expressed protein | ||
| n-199 | class-I | 08g26230.7 | 10 | 0 | 0.01 | expressed protein |
| 01g49065.1 | 11 | 0 | 0.01 | expressed protein | ||
| n-220 | class-I | 06g38080.1 | 12 | 0 | 0.00 | von Willebrand factor type A domain containing protein |
| n-047 | class-I | 01g44140.1 | 37 | 0 | 0.02 | expressed protein |
| n-054 | class-II | 09g14560.1 | 16 | 0 | 0.04 | expressed protein |
| n-108 | class-II | 06g37610.1 | 16 | 0 | 0.01 | Cyclopropane-fatty acyl-phospholipid synthase |
| 06g37610.2 | 17 | 0 | 0.01 | Cyclopropane-fatty-acyl-phospholipid synthase | ||
| n-118 | class-II | 09g37240.1 | 101 | 0 | 0.04 | glutathione S-transferase, C-terminal domain containing protein |
| 06g38080.1 | 12 | 0 | 0.04 | von Willebrand factor type A domain containing protein | ||
| n-139 | class-I | 07g02330.1 | 15 | 0 | 0.02 | protein phosphatase 2C |
| n-140 | class-I | 09g27250.1 | 23 | 0 | 0.00 | plant viral response family protein |
| n-200 | class-II | 02g43110.1 | 11 | 0 | 0.03 | sodium/calcium exchanger 1 precursor |
| n-168 | class-I | 08g38620.3 | 24 | 0 | 0.04 | expressed protein |
miRNA:target pairs of novel miRNAs that have significant degradome reads (≥10), category (≤2) and P-value (≤0.05).