Table 2. Linkage groups and regions that contain loci with sex-linked segregation in 226 Atlantic cod specimens.
LG | Start (bp) | Stop (bp) | Size (bp) | Sex-linked (n) | Total (n) | Max-p |
---|---|---|---|---|---|---|
08a | 1784400 | 1784813 | 413 | 11 | 23 | 47 |
08b | 24118524 | 24118864 | 340 | 8 | 14 | 19 |
11 | 11864114 | 11918378 | 54264 | 127 | 472 | 67 |
14 | 27062221 | 27062388 | 167 | 3 | 8 | 22 |
15 | 3678047 | 3679605 | 1558 | 14 | 64 | 41 |
17 | 18769676 | 18769822 | 146 | 3 | 6 | 26 |
Start and Stop refer to the location of the first and last locus with a high (greater than six standard deviation from the mean) Fisher’s exact test p-value in a particular region. Size is calculated as the difference between Start and Stop. For each region, the number of sex-linked loci, total number of loci (including those that are not linked to sex, using a MAF of 0.05) and the maximum p-value (Max-p) observed in that region are given.