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. 2004 Aug;42(8):3711–3730. doi: 10.1128/JCM.42.8.3711-3730.2004

TABLE 1.

Primers used for PCR and for sequencing of 16S and 23S rRNA genes of B. cereus group bacteriaa

Name Sequence Location
P1 5′-GTT TGA TCC TGG CTC AG 11-27 (16S rRNA)
P10 5′-CCA GTC TTA TGG GCA GGT TAC 136-116 (16S rRNA)
P11 5′-TCC ATA AGT GAC AGC CGA AGC 226-206 (16S rRNA)
P5 5′-CTA CGG GAG GCA GCA GTG GG 340-360 (16S rRNA)
P3 5′-GWA TTA CCG CGG CKG CTG 535-517 (16S rRNA)
P2 5′-GGA TTA GAT ACC CTG GTA GT 784-803 (16S rRNA)
P6 5′-CCG TCA ATT CCT TTR AGT TT 926-907 (16S rRNA)
P8 5′-TTC GGG AGC AGA GTG ACA GGT 1029-1049 (16S rRNA)
P9 5′-TAC ACA CCG CCC GTC ACA CCA 1392-1412 (16S rRNA)
P4 5′-RGT GAG CTR TTA CGC 1513-1492 (16S rRNA)
Pr1 5′-CCG AAT GGG GVA ACC C 114-129 (23S rRNA)
Pr13 5′-CCG TTT CGC TCG CCG CTA CTC 262-242 (23S rRNA)
PB1 5′-TAG TGA TCG ATA GTG AAC CAG 485-505 (23S rRNA)
Pr2 5′-CAT TMT ACA AAA GGY ACG C 621-603 (23S rRNA)
Pr3 5′-GCG TRC CTT TTG TAK AAT G 603-621 (23S rRNA)
PB2 5′-TAG TGA TCG ATA GTG AAC CAG 755-736 (23S rRNA)
PB3 5′-TAG TGA TCG ATA GTG AAC CAG 969-990 (23S rRNA)
Pr4 5′-RGT GAG CTR TTA CGC 1151-1137 (23S rRNA)
Pr5 5′-WGC GTA AYA GCT CAC 1136-1150 (23S rRNA)
PB4 5′-CAT ACC GGC ATT CTC ACT TC 1308-1289 (23S rRNA)
PB5 5′-ACA GGC GTA GGC GAT GGA C 1408-1426 (23S rRNA)
PB8 5′-AAC CTT TGG GCG CCT CC 1679-1661 (23S rRNA)
Pr6 5′-CYA CCT GTG WCG GTT T 1673-1659 (23S rRNA)
Pr7 5′-AAA CCG WCA CAG GTR G 1659-1673 (23S rRNA)
Pr8 5′-CAY GGG GTC TTT RCG TC 2092-2076 (23S rRNA)
Pr9 5′-GAC GYA AAG ACC CCR TG 2076-2092 (23S rRNA)
Pr10 5′-GAG YCG ACA TCG AGG 2535-2521 (23S rRNA)
Pr11 5′-CCT CGA TGT CGR CTC 2521-2535 (23S rRNA)
Pr12 5′-GYT TAG ATG CYT TC 2783-2770 (23S rRNA)
R1 5′-GGC GGC GTC CTA CTC TCA C 112-95 (5S rRNA)
a

Primers P1 to P4, Pr1 to Pr7, and R1 were used for DNA amplification. All other primers were utilized for sequencing. Primers P8, P9, P10, and P11 were selected de novo; other primers were described earlier (for details, see reference 32).