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. 2016 Apr 18;11(5):e1177693. doi: 10.1080/15592324.2016.1177693

Table 1.

Primers for genomic PCR, cloning and sub-cloning.

Primer name* Sequence Target gene
[Genomic PCR]    
 HPT-F1 5′-ATTCCGGAAGTGCTTGACAT-3′ HPT (T-DNA)
 HPT-R3 5′-CAGTCCTCGGAAAGCATCAG-3′  
 PDFR-F1 5′-TGGCGTTCCTTAAACAGCTT-3′ TfDFR promoter
 PDFR-R2 5′-TGAACACCGTTGCTTTTTGA-3′  
 35S-F1 5′-CGCACAATCCCACTATCCTT-3′ 35 S promoter
 PhAN2-R1 5′-GGTCCATGCACCTTTCCTTA-3′ PhAN2
 PhPH4-R1 5′-TGATGATGATGGGGTTCTCA-3′ PhPH4
 InItNHX1-R1 5′-CCGAATTTTGGAGCAAAGAA-3′ InNHX1, ItNHX1
 InNHX2-R1 5′-AGTGTCCCAACGTCAACTCC-3′ InNHX2
[Cloning]    
 AN2-UP-F3 5′-CTTTCTTTGTCCTTTAGTTGTCAGTTGCAGTGAG-3′ PhAN2
 AN2-UP-R1 5′-AATTTCAAATGTCCAACGATTTCAACTGTAGTGTTT-3′  
 PH4-UP-F1 5′-CTCCCCTCCCAAATTTAGTACTATGACTTTATC-3′ PhPH4
 PH4-UP-R3 5′-AACCCTCACATACATATATATATAGCTACAACATCA-3′  
 InNHX1-UP-F1 5′-CCCCACATCTCACCTTTCAAGTGATTTGTATGTTTT-3′ ItNHX1
 InNHX1-UP-R1 5′-TGAGAAGACTTTCACCCAGCCCATTTCATAAGAG-3′  
[Subcloning]    
 AN2-F1-SmaI 5′-AATAATCCCGGGATGAGTACTTCTAATGCATCAACATCAGGA-3′ PhAN2
 AN2-R1-SmaI 5′-AATAATCCCGGGACTAACTAAATCCCATATGTCATCAATATCAACTG-3′  
 PhPH4-F1-SmaI 5′-AATAATCCCGGGATGAGAACCCCATCATCATCATCAACAA-3′ PhPH4
 PhPH4-R1-SmaI 5′-AATAATCCCGGGACTGGGATTATATTGATCAGATGAAGGTGTGGA-3′  
 InNHX1-F1-SmaI 5′-AATAATCCCGGGATGGCGTTCGGGTTGTCTTCTT-3′ InNHX1
 InNHX1-R1-SalI 5′-AATAATGTCGACTCATCTAGGGCTCTGCTCAACTGG-3′  
 InNHX2-F1-DraI 5′-AATAATTTTAAAATGGGAGTTGACGTTGGGACAC-3′ InNHX2
 InNHX2-R1-SalI 5′-AATAATGTCGACTCACTGCCATTGTGGTTCATTCTG-3′  
 ItNHX1-F1-SmaI 5′-AATAATCCCGGGATGGCGTTCGGATTGTCTTCTTT-3′ ItNHX1
 ItNHX1-R1-SalI 5′-AATAATGTCGACTCATCTAGGGCTCTGCTCAGCTG-3′  
 HSPt-F-SacI 5′-AAAGAGCTCATATGAAGATGAAGATGAAA-3′ HSP terminator
 HSPt-R-EcoRI 5′-AAAGAATTCCTTATCTTTAATCATATTCC-3′  
*

‘F’ represents forward primer and ‘R’ represents reverse primer.