Table 3.
Subset of nuclear localized proteins identified by LC-MS-MS in both cerk1 AND Col-0 plants following chitosan treatment.
| Protein description |
Uniprot ID |
AGI |
|---|---|---|
| Miscellanous | ||
| Homologous to the co-chaperon DNAJ protein | Q94AW8 | AT3G44110 |
| EPITHIOSPECIFIER MODIFIER 1, defense response to bacterium | Q9LJG3 | AT3G14210 |
| RECEPTOR FOR ACTIVATED C KINASE 1 A, MAP-kinase scaffold activity | O24456 | AT1G18080 |
| DNA-RNA binding proteins | ||
| Nuclear RNA binding protein A-like protein | Q8LDQ7 | AT5G47210 |
| GLYCINE-RICH RNA-BINDING PROTEIN 7, DNA binding, RNA binding | C0Z2N6 | AT2G21660 |
| mRNA splicing factor | B3H6J5 | AT3G49601 |
| RNA BINDING PROTEIN, RNA modification, RNA processing, RNA stabilization | Q04836 | AT4G24770 |
| RNA polymerase I-associated factor PAF67 | F4JY76 | AT5G25754 |
| ATWTF1, RNA recognition domain | A0MFS5 | AT4G01037 |
| GENERAL REGULATORY FACTOR 3, 14-3-3 gene | P42644 | AT5G38480 |
| COPPER RESPONSE DEFECT 1, putative ZIP protein, DNA binding | Q9M591 | AT3G56940 |
| Histone deacetylase HDT2 | Q56WH4 | AT5G22650 |
| MAR-binding filament-like protein 1, DNA-binding protein | Q9LW85 | AT3G16000 |
| Nucleosome assembly protein 1-like 1 | B3H684 | AT4G26110 |
| Emsy N Terminus and plant Tudor-like domain, defense response to fungus | Q9C7C4 | AT3G12140 |
| Histone deacetylase HD2A | F4J378 | AT3G44750 |
| Serine/arginine-rich SC35-like splicing factor | Q9LHP2 | AT3G13570 |
| U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B, splicing | O22922 | AT2G30260 |
| DEK domain-containing chromatin associated protein | Q84JB7 | AT5G63550 |
| ATGRP8, glycine-rich protein with RNA binding domain at the N-terminus. | B9DFJ8 | AT4G39260 |
| MLP-LIKE PROTEIN 423, defense response, mRNA modification | Q93VR4 | AT1G24020 |
| Involved in translation | ||
| LOS1, translation elongation factor 2 | Q9ASR1 | AT1G56070 |
| Ribosomal protein L4/L1 family | F4KDU5 | AT5G02870 |
| EMBRYO DEFECTIVE 2184, structural constituent of ribosome | Q9FWS4 | AT1G75350 |
| Eukaryotic translation initiation factor 3 subunit E | Q9C5Z3 | AT3G57290 |
| Eukaryotic translation initiation factor 3 subunit B | F4K4D5 | AT5G27640 |
| 40S ribosomal protein S3a-1 | Q9CAV0 | AT3G04840 |
| 40S ribosomal protein S16-3 | A8MRX2 | AT5G1838 |
| Ribosomal protein L19 | Q8W101 | AT1G02780 |
| 40S ribosomal protein S20-1 | P49200 | AT3G45030 |
| Translation elongation factor EF1B/ribosomal protein S6 | D7KNE3 | AT5G19510 |
| Elongation factor 1-β 2 | Q9SCX3 | AT5G19510 |
| Ribosomal protein S10p/S20e family protein | Q9LK61 | AT3G13120 |
| Ribosomal protein L10 family protein | B5X0P0 | AT5G13510 |
| 50S ribosomal protein L19-2 | Q8RXX5 | AT5G47190 |
| TRANSLATION INITIATION FACTOR 3 SUBUNIT H1 | Q9C5Z2 | AT1G10840 |
| RIBOSOMAL PROTEIN S10E B | Q9FFS8 | AT5G41520 |
| 60S ribosomal protein L36-2 | Q9M352 | AT3G53740 |
| 60S ribosomal protein L17-1 | Q93VI3 | AT1G27400 |
| 40S ribosomal protein S24e | Q9SS17 | AT3G04920 |
| Elongation factor 1B β | A8MRC4 | AT1G30230 |