Table 1.
Sl. | KEGG | Binomial | Common | No. of | No. of | 18S rRNA |
---|---|---|---|---|---|---|
No. | code | nomenclature | name | genes | modules | sequence id |
1 | aag | A. aegypti | Yellow fever | 34 | 6 | U65375 [G] |
mosquito | ||||||
2 | aga | A. gambiae | Mosquito | 31 | 6 | AM157179 [G] |
3 | ame | A. mellifera | Honey bee | 38 | 7 | AY703484 [G-P] |
4 | aml | A. melanoleuca | Giant Panda | 59 | 8 | GL196163 [G] |
5 | api | A. pisum | Pea aphid | 32 | 6 | U27819 [G] |
6 | bfo | B. floridae | Florida lancelet | 45 | 7 | M97571 [G] |
7 | bmy | B. malayi | Filaria | 34 | 7 | AAQA01003643 [G-S] |
8 | bta | B. taurus | Cow | 59 | 8 | NR_036642 [G] |
9 | cbr | C. briggsae | - | 23 | 3 | FJ380929 [G] |
10 | cel | C. elegans | Nematode | 23 | 3 | EU196001 [G-P] |
11 | cfa | C. familiaris | Dog | 58 | 8 | AAEX02007663 [G-S] |
12 | cin | C. intestinalis | Sea squirt | 42 | 7 | AB013017 [G-P] |
13 | cqu | C. quinquefasciatus | Southern house | 35 | 7 | AAWU01013261 [G-S] |
mosquito | ||||||
14 | dan | D. ananassae | - | 37 | 7 | XR_046314 [G] |
15 | der | D. erecta | - | 37 | 7 | XR_046906 [G] |
16 | dgr | D. grimshawi | - | 37 | 7 | [S-E] |
17 | dme | D. melanogaster | Fruit fly | 37 | 7 | M21017 [G] |
18 | dmo | D. mojavensis | - | 37 | 7 | XR_047783 [G] |
19 | dpe | D. persimilis | - | 32 | 5 | XR_046906 [G] |
20 | dpo | D. pseudoobscura | - | 32 | 6 | XR_053284 [G] |
pseudoobscura | ||||||
21 | dre | D. rerio | Zebrafish | 59 | 8 | AC139725 [G-S] |
22 | dse | D. sechellia | - | 37 | 7 | XR_048770 [G] |
23 | dsi | D. simulans | - | 22 | 5 | AY037174 [G] |
24 | dvi | D. virilis | - | 38 | 7 | XR_049279 [G] |
25 | dwi | D. willistoni | - | 37 | 7 | XR_049811 [G] |
26 | dya | D. yakuba | - | 36 | 6 | XR_050457 [G] |
27 | ecb | E. caballus | Horse | 56 | 8 | AJ311673 [G-P] |
28 | gga | G. gallus | Chicken | 54 | 8 | M59389 [G] |
29 | hmg | H. magnipapillata | - | 31 | 6 | HQ392522 [G-P] |
30 | hsa | H. sapiens | Human | 60 | 8 | X03205 [G] |
31 | isc | I. scapularis | Black-legged | 30 | 6 | ABJB010180167 [G-S] |
tick | ||||||
32 | mcc | M. mulatta | Rhesus Monkey | 59 | 8 | FJ436026 [G-P] |
33 | mdo | M. domestica | Opossum | 55 | 7 | AJ311676 [G-P] |
34 | mmu | M. musculus | Mouse | 60 | 8 | X00686 [G] |
35 | nve | N. vectensis | Sea anemone | 33 | 6 | AF254382 [G] |
36 | nvi | N. vitripennis | Jewel wasp | 38 | 7 | GQ410677 [G-P] |
37 | oaa | O. anatinus | Platypus | 47 | 7 | AJ311679 [G-P] |
38 | phu | P. humanus | Human body | 37 | 7 | FJ267399 [G-P] |
corporis | louse | |||||
39 | ptr | P. troglodytes | Chimpanzee | 58 | 8 | AADA01268803 [G-S] |
40 | rno | R. norvegicus | Rat | 60 | 8 | X01117 [G] |
41 | smm | S. mansoni | - | 25 | 5 | U65657 [G] |
42 | spu | S. purpuratus | Purple | 41 | 6 | L28055 [G] |
sea urchin | ||||||
43 | ssc | S. scrofa | Pig | 21 | 4 | AY265350 [G] |
44 | tad | T. adhaerens | - | 23 | 6 | Z22783 [G] |
45 | tca | T. castaneum | Red flour | 37 | 7 | HM156711 [G-P] |
beetle | ||||||
46 | tgu | T. guttata | Zebra finch | 47 | 7 | ABQF01063677 [G-S] |
47 | xla | X. laevis | African | 51 | 8 | X04025 [G] |
clawed frog | ||||||
48 | xtr | X. tropicalis | Western | 57 | 8 | AAMC01103672 [G-S] |
clawed frog |
Notations: G: GenBank accession number (Complete sequence), G-P: GenBank accession number (Partial Sequence), G-S: GenBank accession number of predicted 18S rRNA sequence as given in SILVA database (Pruesse et al. 2007), S-E: Sequence taken from (Stage and Eickbush 2007)