Table 2. Number of genes subjected to GAN reconstruction and properties of resulted GANs.

method	NCSRM				BETR
cell line and applied radiation dose	Increased sensitivity (1 Gy)	normal sensitivity (1 Gy)	Increased sensitivity (10 Gy)	normal sensitivity (10 Gy)	Increased sensitivity (1 Gy)	normal sensitivity (1 Gy)	Increased sensitivity (10 Gy)	normal sensitivity (10 Gy)
number of genes taken for network reconstruction	2335	7	6019	3892	923	12	3889	1256
number of nodes remained in the network	1140	-	3483	2735	336	-	2299	773
number of edges in the network	12198	-	114629	84695	3268	-	126378	16862
network density	0.00939	-	0.00945	0.01133	0.02903	-	0.02392	0.02826
density of the Reactome interaction network	0.00536

Gene association network reconstructions were performed using the GeneNet method [18]. Association between two genes was considered as significant if posterior edge probability was equal or greater than 0.95. Densities of the reconstructed networks were compared with the density of the Reactome interaction network in order to assess their complexity.