Table 2.
Plant:stress systems collated from PLEXdb for meta-analysis.
| PLEXdb experiment number | GSE experiment number | Host species | Stress type | Stress name | References |
|---|---|---|---|---|---|
| AT19 | A. thaliana | Abiotic | Cold | Craigon et al., 2004 | |
| Abiotic | Drought | ||||
| AT31 | GSE12856 | A. thaliana | Biotic (biotrophic fungus) | Blumeria graminis f.sp. hordei (barley powdery mildew) | Jensen et al., 2008 |
| AT49 | GSE5525 | A. thaliana | Biotic (necrotrophic fungus) | Alternaria brassicola (black spot) | De Vos et al., 2005 |
| Biotic (insect) | Pieris rapae (small cabbage worm) | ||||
| Biotic (insect) | Frankliniella occidentalis (western flower thrips) | ||||
| Biotic (insect) | Myzus persicae (green peach aphid) | ||||
| AT51 | GSE5684 | A. thaliana | Biotic (necrotrophic fungus) | Botrytis cinerea (gray mould) | |
| AT52 | GSE5685 | A. thaliana | Biotic (bacteria) | Pseudomonas syringae | |
| AT54 | GSE5731 | A. thaliana | Abiotic | UV-A | |
| Abiotic | UV-B | ||||
| Abiotic | Visible light | ||||
| Biotic (oomycete) | Phytophthora parasitica | ||||
| AT59 | A. thaliana | Biotic (biotrophic) | Golovinomyces orontii (powdery mildew) | ||
| AT63 | GSE6516 | A. thaliana | Biotic (insect) | Bemisia tabaci (silverleaf whitefly) | Kempema et al., 2007 |
| AT100 | GSE18329 | A. thaliana | Biotic (oomycete) | Hyaloperonospora parasitica (downy mildew) | Bhattarai et al., 2010 |
| AT115 | GSE14332 | A. thaliana | Abiotic | Wounding | |
| AT123 | GSE22671 | A. thaliana | Abiotic | Dark | González-Pérez et al., 2011 |
| Abiotic | High light | ||||
| AT138 | GSE37553 | A. thaliana | Biotic (nematode) | Meloidogyne incognita (root-knot nematode) | |
| BB9 | GSE33407 | H. vulgare | Biotic (necrotrophic fungus) | Fusarium graminearium (head blight) | Bodd et al., 2006 |
| BB61 | GSE33401 | H. vulgare | Biotic (hemibiotrophic fungus) | Cochliobolus sativus (spot blotch) | Millett et al., 2009 |
| Biotic (biotrophic fungus) | Puccinia hordei (brown rust) | ||||
| BB63 | GSE14521 | H. vulgare | Abiotic | Boron | Öz et al., 2009 |
| BB65 | GSE10332 | H. vulgare | Abiotic | Cold | Svensson et al., 2006 |
| BB71 | GSE12584 | H. vulgare | Biotic (insect) | Rhopalosiphum padi (bird cherry-oat aphid) | Delp et al., 2009 |
| BB74 | GSE17238 | H. vulgare | Biotic (biotrophic fungus) | Puccinia graminis (stem rust) | McGrann et al., 2009 |
| BB79 | GSE8618 | H. vulgare | Biotic (bacteria) | Pseudomonas aeruginosa | |
| BB81 | GSE10329 | H. vulgare | Abiotic | Freezing | |
| BB83 | GSE15295 | H. vulgare | Abiotic | Mercury | |
| BB89 | GSE17669 | H. vulgare | Abiotic | Drought (seed) | Abebe et al., 2010 |
| BB92 | GSE43906 | H. vulgare | Biotic (bacteria) | Pseudomonas syringae | Colebrook et al., 2012 |
| BB102 | GSE23896 | H. vulgare | Abiotic | Heat | Mangelsen et al., 2011 |