Fig. 1.

Typical display from CHiCP showing NRIP1 in CD34+ cells integrated with Franke et al. (2010). Crohn’s disease GWAS summary statistics. (A) Search box for gene, reference SNP (rs) ID or genomic location; (B) interaction between HindIII fragments; (C) PCHiC datasets and tissues for selection; (D) association summary statistics; (E) gene type with colour depicting biotype; (F) genomic scale and HindIII cleavage sites; (G) linear representation of Bait fragment; (H) linear representation of the target fragment; (I) canonical genes with transcription start sites shown as outlined exons; (J) epigenetic cell states for selected tissue (yellow – enhancers; dark green – weak transcription; light green – transcription at gene 5′ and 3′; red – flanking active TSS)