Table 4.
Chromosome | Recombination rate (cM/Mb) | Chromosome length (Mbp)b | GC content (%) | Gene densityc | Transposable element densityd | Number of tandem duplicated genese | Diversity (Global HHW) | Divergence (Global Fst) |
---|---|---|---|---|---|---|---|---|
1 | 3.68 | 40.30 | 0.380 | 63.55 | 401.86 | 0.088 | 0.181 | 0.400 |
2 | 2.97 | 64.24 | 0.364 | 53.05 | 392.64 | 0.092 | 0.206 | 0.376 |
3 | 2.16 | 80.09 | 0.357 | 42.84 | 416.24 | 0.103 | 0.229 | 0.354 |
4 | 2.77 | 41.98 | 0.372 | 53.03 | 430.05 | 0.085 | 0.188 | 0.395 |
5 | 1.98 | 74.73 | 0.353 | 44.35 | 418.50 | 0.100 | 0.215 | 0.359 |
6 | 3.66 | 53.89 | 0.377 | 71.49 | 361.55 | 0.077 | 0.175 | 0.400 |
7 | 2.74 | 52.45 | 0.368 | 52.70 | 412.18 | 0.092 | 0.219 | 0.373 |
8 | 2.69 | 74.33 | 0.375 | 56.09 | 439.17 | 0.090 | 0.189 | 0.383 |
9 | 3.01 | 39.02 | 0.375 | 61.00 | 398.21 | 0.096 | 0.194 | 0.391 |
10 | 3.81 | 39.36 | 0.383 | 69.77 | 406.39 | 0.090 | 0.188 | 0.405 |
11 | 3.27 | 45.51 | 0.377 | 67.35 | 389.91 | 0.088 | 0.165 | 0.403 |
aAll chromosome attributes are from the Eucalyptus grandis reference genome [19], except diversity and divergence which were estimated by Hudson et al. [34]
bEquivalent to 'Scaffold Size' in Table 2
c Number of genes per Mbp
d Number of transposable elements per Mbp
e The proportion of annotated genes which are tandem duplicates