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. Author manuscript; available in PMC: 2016 Aug 10.
Published in final edited form as: Biochem J. 2011 May 1;435(3):651–660. doi: 10.1042/BJ20101810

Table 1.

FNIII domain constructs used in this work as shown in Fig. 3A and the results of their bacterial expression. Note that for constructs that did not express as soluble protein the protein yield refers to soluble protein obtained after Nvoy assisted refolding. Column headings: D: Domain; Start/End: position of first and last residue in full length human polycystin 1; Size: number of amino acids of polycystin 1 in the construct; MW: molecular weight in kD; ε: molar extinction coefficient in M−1 cm−1; Host: bacterial expression host ArcticExpress (AE) or BL21* (Star); Soluble: is the protein expressed soluble?; Yield: amount of purified, soluble protein in mg from 1L LB culture; Solubility: rough qualitative estimate of protein solubility after purification.

D Start End Size MW ε Host Soluble Yield Solubility Comments
D1 2152 2262 111 12.6 12950 Star NO 50 Modest -
D1 2152 2262 111 12.6 12950 AE YES 1 Modest soluble aggregates
D1 2155 2254 100 11.4 12950 Star NO 15 Poor -
D1 2155 2254 100 11.4 12950 AE NO - - -
D2 2257 2369 113 12.3 20970 Star NO 50 Good -
D2 2257 2369 113 12.3 20970 AE YES 2 Good -
D2 2257 2374 118 12.9 20970 Star NO 45 Modest -
D2 2257 2374 118 12.9 20970 AE YES 1 Modest precipitated after short time
D2 2282 2361 80 8.8 13980 Star NO ~2 Very poor -
D2 2282 2361 80 8.8 13980 AE NO - - -
D3 2371 2474 104 11.2 11460 Star NO 20 Modest degradation
D3 2374 2474 101 10.9 11460 Star NO 30 Modest degradation
D3 2374 2474 101 10.9 11460 AE NO - - -
D3 2392 2463 76 8.2 6990 Star NO 10 Poor degradation
D4 2468 2577 110 11.8 9970 Star NO - - Very poor expression
D4 2477 2577 101 10.9 9970 Star NO - - Very poor expression
D4 2477 2577 101 10.9 9970 AE NO - - Very poor expression
D4 2485 2573 93 10 9970 Star NO - - Very poor expression