Table 1.
Gene diversity and distribution of 10 mitochondrial haplotypes discovered in 392 red foxes from 13 samples and miscellaneous sites in California. Sampling sites include the following abbreviations: Half Moon Bay (HMB), Santa Barbara (SB), and San Joaquin Valley (SJV). The particular location of 10 samples from somewhere in the San Francisco Bay wetlands (SFB) was unknown (unk)
| Samples | n | Gene diversity | D‐19 | O‐26 | N‐7 | G‐38 | A‐273 | E‐9 | F‐9 | F‐12 | F‐14 | K‐36 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SFB South | 44 | 0.428 | – | 1 | 9 | 1 | – | – | – | 32 | 1 | – |
| SFB East | 54 | 0.205 | – | – | 48 | 2 | – | – | 1 | 3 | – | – |
| SFB West | 17 | 0.208 | – | – | 2 | – | – | – | 15 | – | – | |
| SFB‐unk | 10 | – | – | – | 2 | 4 | – | – | – | 4 | – | – |
| Half Moon Bay | 24 | 0.517 | – | 7 | 2 | 15 | – | – | – | – | – | – |
| Monterey | 115 | 0.235 | – | 1 | 4 | 100 | – | – | – | 10 | – | – |
| Morro Bay | 19 | 0.100 | – | – | 1 | 18 | – | – | – | – | – | – |
| Santa Barbara | 13 | 0.000 | – | – | – | – | – | – | – | – | – | 13 |
| SJV North | 33 | 0.691 | – | – | 5 | 14 | – | – | – | 10 | 4 | – |
| SJV South | 28 | 0.513 | – | – | 7 | 3 | – | 18 | – | – | – | – |
| Southern CA | 9 | 0.593 | – | – | – | – | 2 | – | 5 | 2 | – | – |
| Contact zone | 9 | 0.593 | 5 | – | 1 | 3 | – | – | – | – | 2 | – |
| North coastal | 5 | – | – | – | – | 5 | – | – | – | – | – | – |
| Presidio | 4 | – | – | 3 | – | 1 | – | – | – | – | – | – |
| Miscellaneous | 6 | – | – | – | 4 | – | – | 1 | 1 | – | – | |
| Total | 392 | 0.726 | 5 | 12 | 81 | 170 | 2 | 18 | 7 | 77 | 7 | 13 |