Table 3.

Genetic diversity between historical and recent populations. Summary diversity statistics across all loci are given by each population, including observed heterozygosity (H _o), expected heterozygosity (H _e), and inbreeding coefficient (G _IS). Allelic richness (AR) is corrected for sample size. Each asterisk in “Out of HWE” indicates one locus–populations pair that significantly deviated from HWE following sequential Bonferroni correction (of 77 historical pairs and 176 recent pairs). The mean h (hybrid index score) is an average of h for all individuals in the population, where a value of 1 indicates pure P. fouquettei and 0 indicates pure P. nigrita

Pop ID	N	Num alleles	Eff Num alleles	AR	Obs Het (H o)	Exp Het (H e)	Inbreed coeff (G IS)	Out of HWE	Mean h
Historical populations
H1	16	13.091	8.907	5.12	0.741	0.854	0.132	*	1
H2	4	4.727	3.671	3.61	0.727	0.799	0.09	**	0.911
H3	17	8.818	5.313	4.14	0.678	0.809	0.162	*	0.893
H4	25	10.273	6.108	4.39	0.684	0.791	0.135		0.824
H5	6	4.909	3.414	3.55	0.773	0.75	−0.03	*	0.756
H6	30	8.364	4.397	3.8	0.68	0.727	0.064		0.087
H7	19	9	5.381	4.06	0.697	0.727	0.042		0
Recent populations
A	7	7.182	5.483	4.27	0.764	0.845	0.096		1
B	11	9.273	6.855	4.62	0.729	0.865	0.157	*	0.604
C	8	8.273	6.394	4.35	0.602	0.851	0.292	*	0.599
D	4	5	3.938	3.7	0.614	0.871	0.296		0.547
E	6	5	3.957	3.58	0.644	0.794	0.189		0.698
F	5	5.091	3.988	3.62	0.623	0.801	0.222		0.66
G	23	9.818	5.345	4.1	0.613	0.77	0.204	**	0.563
H	4	4.545	3.697	3.55	0.682	0.788	0.135		0.595
I	9	6.727	4.631	4.01	0.688	0.813	0.154	*	0.511
J	26	9.909	5.978	4.14	0.678	0.748	0.093		0.279
K	22	11	6.087	4.27	0.609	0.806	0.244	****	0.323
L	13	5.727	3.856	2.83	0.618	0.76	0.187	*	0.276
M	5	5	3.732	2.56	0.613	0.794	0.228		0
N	5	4.375	3.381	2.43	0.65	0.75	0.133		0
O	4	5	4.308	2.7	0.75	0.875	0.143		0
P	9	8.636	6.159	4.66	0.797	0.87	0.084	**	0