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. 2016 Aug 12;6:31316. doi: 10.1038/srep31316

Table 1. Expression of genes related with alkane and fatty acid metabolism in A. borkumensis SK2 under 0.1 and 10 MPa.

Pathway Regulation log2 FC 10 MPa 0.1 MPa Cluster ID Locus Tag Description
Fatty acid metabolism
  + 1.89 1557.7 421.7 764 ABO_0201 cytochrome P450 family protein
  + 1.78 1183.1 345.7 764 ABO_2288 cytochrome P450
  + 1.70 834.6 257.1 914 ABO_0203 FAD-dependent oxidoreductase family protein
  + 1.10 867.5 405.8 407 ABO_0122 alkane-1-monooxygenase
  = −0.20 37.0 42.5 169 ABO_0162 rubredoxin reductase
  = −0.44 159.4 215.9 1408 ABO_1231 alcohol dehydrogenase
  − −0.53 43.3 62.5 1119 ABO_0117 alcohol dehydrogenase/ formaldehyde dehydrogenase
  − −0.64 106.3 166.2 30 ABO_0061 alcohol dehydrogenase
  − −0.99 31.4 62.5 696 ABO_2483 alcohol dehydrogenase
  − −1.54 28.1 81.7 2020 ABO_0962 aldehyde dehydrogenase family protein
  − −1.65 55.3 173.5 1325 ABO_2384 cytochrome P450
Fatty acid biosynthesis
  + 0.97 190.9 97.2 1167 ABO_1071 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase
  + 0.77 374.4 219.1 2166 ABO_1154 FabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase
  + 0.76 264.6 156.2 299 ABO_0835 fabA; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase
  + 0.57 136.3 91.8 49 ABO_1069 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase
  = 0.12 113.6 104.5 1382 ABO_0834 3-oxoacyl-[acyl-carrier-protein] synthase
  = −0.17 43.0 48.5 2093 ABO_1215 enoyl-[acyl-carrier-protein] reductase
  − −3.48 87.5 979.0 1649 ABO_1713 3-ketoacyl-(acyl-carrier-protein) reductase
Fatty acid degradation
  = 0.50 100.8 71.5 143 ABO_1653 3-ketoacyl-CoA thiolase
  = −0.07 104.4 109.9 1313 ABO_1652 multifunctional fatty acid oxidation complex subunit alpha
  = −0.40 66.1 86.9 1467 ABO_0957 acyl-CoA dehydrogenase
  - −0.67 59.6 94.9 660 ABO_1566 fatty oxidation complex subunit alpha
  − −0.71 83.2 135.9 644 ABO_0571 acyl-CoA dehydrogenase
  − −1.55 30.6 89.5 1976 ABO_0253 acetyl-CoA acyltransferase
  − −1.55 19.4 56.9 689 ABO_1702 acyl-CoA dehydrogenase middle domain-containing protein
  − −1.70 52.0 168.7 55 ABO_1772 acyl-CoA dehydrogenase
  − −2.57 77.6 459.3 1865 ABO_1121 acyl-CoA dehydrogenase