Table 1.
Fusarium isolates used for pathogenicity testing and/or molecular characterization in this study.
| Fusarium species | Isolate code | Location | Origin | Source* | Year isolated |
|---|---|---|---|---|---|
| Isolates used for pathogenicity testing and/or molecular characterization | |||||
| F. oxysporum | A13 | Bedfordshire, UK, site 1 | Onion bulb | V. Vagany, WCC | 2009 |
| F. oxysporum | A23 | Bedfordshire, UK, site 2 | Onion bulb | V. Vagany, WCC | 2009 |
| F. oxysporum | A28 | Bedfordshire, UK, site 2 | Onion bulb | V. Vagany, WCC | 2009 |
| F. oxysporum | A35 | Bedfordshire, UK, site 3 | Onion bulb | V. Vagany, WCC | 2009 |
| F. oxysporum | F1 | Bedfordshire, UK, site 4 | Onion bulb | V. Vagany, WCC | 2010 |
| F. oxysporum | 195 | Suffolk, UK, site 1 | Onion bulb | C. Handy, WCC | 2012 |
| F. oxysporum | 224 | Suffolk, UK, site 1 | Onion bulb | C. Handy, WCC | 2012 |
| F. oxysporum | 244 | Suffolk, UK, site 1 | Onion bulb | C. Handy, WCC | 2012 |
| F. oxysporum | A21 | Suffolk, UK, site 2 | Onion bulb | V. Vagany, WCC | 2009 |
| F. oxysporum | R3 | Suffolk, UK, site 3 | Onion bulb | V. Vagany, WCC | 2009 |
| F. oxysporum | M1 | Suffolk, UK, site 4 | Onion bulb | V. Vagany, WCC | 2010 |
| F. oxysporum | M9 | Suffolk, UK, site 4 | Onion bulb | V. Vagany, WCC | 2010 |
| F. oxysporum | G12 | Suffolk, UK, site 5 | Onion bulb | V. Vagany, WCC | 2009 |
| F. oxysporum | K3b | Suffolk, UK, site 6 | Onion bulb | V. Vagany, WCC | 2009 |
| F. oxysporum | S1B | Essex, UK, site 1 | Onion bulb | V. Vagany, WCC | 2009 |
| F. oxysporum | A14 | Essex, UK, site 2 | Onion bulb | V. Vagany, WCC | 2009 |
| F. oxysporum | A19 | Essex, UK, site 2 | Onion bulb | V. Vagany, WCC | 2009 |
| F. oxysporum | NL70/7 | Essex, UK, site 3 | Onion bulb | V. Vagany, WCC | 2010 |
| F. oxysporum | A1_2 | Warwickshire, UK | Onion bulb | V. Vagany, WCC | 2008 |
| F. oxysporum f. sp. cepae | FUS2 | Lincolnshire, UK | Onion bulb | R. Noble, East Malling Research | Unknown |
| F. oxysporum | 55 | Lincolnshire, UK, site 1 | Onion bulb | C. Handy, WCC | 2012 |
| F. oxysporum | 84 | Lincolnshire, UK, site 1 | Onion bulb | C. Handy, WCC | 2012 |
| F. oxysporum | 125 | Lincolnshire, UK, site 1 | Onion bulb | C. Handy, WCC | 2012 |
| F. oxysporum | RO2 | Lincolnshire, UK, site 2 | Onion bulb | V. Vagany, WCC | 2010 |
| F. oxysporum | FUS1 | Nottinghamshire, UK | Onion bulb | R. Noble, East Malling Research | Unknown |
| F. oxysporum | FUS3 | Nottinghamshire, UK | Onion bulb | R. Noble, East Malling Research | Unknown |
| F. oxysporum | PG | Cambridgeshire, UK | Onion bulb | T. O'Neill, ADAS | Unknown |
| F. oxysporum | CB3 | UK | Onion set | C. Handy, WCC | 2012 |
| F. oxysporum | HB17 | UK | Onion set | C. Handy, WCC | 2012 |
| F. oxysporum | HB6 | UK | Onion set | C. Handy, WCC | 2012 |
| F. oxysporum | JB4 | UK | Onion set | C. Handy, WCC | 2012 |
| F. oxysporum | NRRL 54002 (FO47) | France | Soil | ARS collection | Unknown |
| F. oxysporum | HAZ | USA | Onion bulb | H. van den Biggelaar, Hazera seeds | Unknown |
| F. oxysporum | L2‐1 | UK, site 1 | Leek | A. Taylor, WCC | 2011 |
| F. oxysporum | L9‐1 | UK, site 2 | Leek | A. Taylor, WCC | 2011 |
| F. oxysporum | ATCC90245 | Colorado, USA | Pinto bean | ATCC collection | 1990 |
| F. oxysporum f. sp. pisi race 1 | FOP1 | UK | Pea | C. Linfield, WCC | Unknown |
| F. oxysporum f. sp. pisi race 2 | FOP2 | UK | Pea | C. Linfield, WCC | Unknown |
| F. oxysporum f. sp. pisi race 5 | FOP5 | UK | Pea | C. Linfield, WCC | Unknown |
| F. oxysporum f. sp. pisi | NRRL36311 | The Netherlands | Pea | ARS collection | Unknown |
| F. oxysporum f. sp. lini | FOLIN | UK | Linseed | C. Linfield, WCC | 2010 |
| F. oxysporum f. sp. dianthi | R207 | UK | Carnation | C. Linfield, WCC | Unknown |
| F. oxysporum f. sp. narcissi | FOXN7 | UK | Daffodil | C. Handy, WCC | 2013 |
| F. oxysporum f. sp. narcissi | FOXN139 | UK | Daffodil | C. Handy, WCC | 2013 |
| F. oxysporum f. sp. freesia | NRRL26990 | The Netherlands | Freesia | ARS collection | Unknown |
| F. oxysporum f. sp. freesia | NRRL26988 | The Netherlands | Freesia | ARS collection | Unknown |
| F. oxysporum f. sp. cubense | E421A3 | UK | Banana | C. Nellist, WCC | Unknown |
| F. avanaceum | L5 | UK, site 1 | Leek | A. Taylor, WCC | 2011 |
| F. proliferatum | A8 | Bedfordshire, UK, site 3 | Onion bulb | V. Vagany, WCC | 2009 |
| F. proliferatum | A40 | Bedfordshire, UK, site 3 | Onion bulb | V. Vagany, WCC | 2009 |
| F. proliferatum | SP1‐2 | Spain | Onion bulb | V. Vagany, WCC | 2010 |
| F. redolens | NL96 | Essex, UK, site 3 | Onion bulb | V. Vagany, WCC | 2010 |
| F. oxysporum f. sp. lycopersici race 3 | NRRL54003 (MN25) | USA | Tomato | ARS Collection | Unknown |
| Genome sequenced isolates used for comparison in molecular characterization | |||||
| F. oxysporum f. sp. pisi | NRRL37622 (HDV247) | Unknown | Pea | ARS Collection | Unknown |
| F. oxysporum | NRRL32931 (FOSC 3‐a) | USA | Human | ARS Collection | Unknown |
| F. oxysporum f. sp. conglutinans | NRRL54008 (PHW808) | USA | Brassica | ARS Collection | Unknown |
| F. oxysporum f. sp. raphani | NRRL54005 (PHW815) | France | Radish | ARS Collection | Unknown |
| F. oxysporum f. sp. radicis‐lycopersici | NRRL26381 (CL57) | USA | Tomato | ARS Collection | Unknown |
| F. oxysporum f. sp. cubense | NRRL54006 (II5) | Indonesia | Banana | ARS Collection | Unknown |
| F. oxysporum f. sp. melonis | NRRL26406 | USA | Melon | ARS Collection | Unknown |
| F. oxysporum f. sp. vasinfectum | NRRL25433 | China | Cotton | ARS Collection | Unknown |
| F. oxysporum f. sp. lycopersici race 2 | NRRL34936 (FOL4287) | USA? | Tomato | ARS Collection | Unknown |
| F. oxysporum | Fo5176 | Australia | Brassica oleracea | ARS Collection | Unknown |
*ATCC, American Type Culture Collection, USA; ARS, Agricultural Research Service culture collection, USA; WCC, Warwick Crop Centre, University of Warwick, UK.