Table 3.
Regions detected on B chromosomes of Siberian roe deer and grey brocket deer with flow-sorted chromosome sequencing
| Region | Genes |
|---|---|
| Siberian roe deer (Capreolus pygargus) | |
| chr3:74,548,027-76,486,586 | LRRIQ3, FPGT, TNNI3K (f) |
| chr28:11,359,721-11,400,841 | - |
| Grey brocket deer (Mazama gouazoubira) | |
| chr1:80,557,678-80,815,945 | LPP (f) |
| chr1:132,195,520-132,248,825 | PIK3CB (f) |
| chr3:53,939,956-54,035,661 | GFI1 |
| chr3:97,346,492-97,530,439 | ACOT11 (f), SSBP3 (f) |
| chr5:112,038,039-112,092,762 | CCND2 |
| chr6:67,475,289-69,302,666 | COX7B2, GABRA4, GABRB1 (f?), LOC536190 (f?), ATP10D, NFXL1, CNGA1, NIPAL1, TXK |
| chr6:72,725,708-72,802,304 | KIT (f) |
| chr6:101,762,919-101,983,089 | COQ2, HPSE, MIR2446, MRPS18C, FAM175A (f) |
| chr6:115,148,215-115,688,073 | MIR2448, FBXL5, CD38 (f?), FGFBP1 |
| chr7:11,112,904-11,187,619 | MAN2B1 (f) |
| chr7:21,377,048-21,645,864 | - |
| chr8:78,145-782,808 | ANXA10, MIR2466 |
| chr10:28,363,651-29,133,083 | TMCO5B |
| chr14:5,823,596-6,377,396 | KHDRBS3 (f) |
| chr17:46,546,364-46,775,437 | MBD3L1, CHFR, ZNF268 (f) |
| chr19:59,129,525-59,366,644 | CDC42EP4, FAM104A, COG1 (f) |
| chr22:1,765,826-1,920,639 | EOMES (f) |
| chr22:11,626,319-11,984,586 | ACAA1, MYD88, OXSR1, XYLB, ACVR2B, DLEC1 (f) |
| chr23:8,994,141-9,084,277 | C23H6orf106 (f), SNRPC (f) |
| chr23:50,678,412-50,701,238 | SERPINB9 |
| chr25:37,085,021-37,276,232 | - |
| chr25:41,480,442-41,787,784 | - |
| chr28:628,155-915,003 | TRIM67, FAM89A, ARV1, TTC13 (f) |
| chr28:12,110,619-12,174,951 | RET |
| chr29:34,728,621-35,503,130 | OPCML (f) |
| chr29:49,338,779-50,252,639 | DHCR7 (f?), NADSYN1, CARS (f) |
Coordinates in cattle genome assembly (bosTau7) are given. Only RefSeq cattle genes are listed, (f) – partial gene fragments located at region margins, (f?) – genes overlapping putative deletions not covered by reads