Table 3. Genotypic characterization of G. lamblia by PCR-RFLP and Assemblage A- and B-specific qPCR.
Assemblage | PCR-RFLP | qPCR | Genotyped samples (PCR-RFLP + qPCR) No. (%) | |||||
---|---|---|---|---|---|---|---|---|
bg | gdh | Total (bg+gdh) | gdh | tpi | orfC4 | Total (gdh+tpi+orfC4) | ||
A | 21 (55.3) | 13 (40.6) | 21 (51.2) | 20 (54.1) | 27 (56.3) | 22 (51.2) | 28 (51.9) | 29 (52.7) |
B | 17 (44.7) | 19 (59.4) | 20 (48.8) | 17 (45.9) | 21 (43.7) | 21 (43.7) | 26 (48.1) | 26 (47.3) |
Total | 38 | 32 | 41 | 37 | 48 | 43 | 54 | 55 |