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. Author manuscript; available in PMC: 2016 Aug 14.
Published in final edited form as: IEEE/ACM Trans Comput Biol Bioinform. 2013 Nov-Dec;10(6):1505–1516. doi: 10.1109/TCBB.2013.28

Fig. 4.

Fig. 4

Comparison of sample rankings by the four similarity measures for the synthetic data set comprising the isomarginal family given by (r1,r2,r3,q1,q2,q3)=(5,5,5,5,5,5). Each sample (horizontal bar) represents a certain number of exact matches, slight mismatches, and large mismatches (corresponding to [green, yellow, and red], or [medium, light, and dark] in grayscale). The length of each color segment corresponds to the number of that type of match in the sample. For each similarity measure, the similarity score corresponding to each sample is shown on the right.