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. 2016 Apr 18;113(18):4964–4969. doi: 10.1073/pnas.1601352113

Table S1.

Primer list used for fine-mapping, BAC sequencing, and transcripts analysis

Primer name Sequences (5′ to 3′) Note
0916-1F CCTCCTTCACTTGGATCACG Mapping
0916-1R CAAAGACCTACGACGGAAGG Mapping
SIBS-2(Allele 1) CGCCAAGAGGAGCCGAACG Mapping
SIBS-2(Allele 2) CGCCAAGAGGAGCCGAACC Mapping
SIBS-2(Common) GAACCGCTCCTCCAAACAAGCTATT Mapping
0916-2F CTTTCGTGAGGTTACCACCC Mapping
0916-2R CCTGAATAAGGCACGAGCTT Mapping
SIBS-7(Allele 1) GGAGATTTAATCTCTCCCAATCCCT Mapping
SIBS-7(Allele 2) GAGATTTAATCTCTCCCAATCCCC Mapping
SIBS-7(Common) ATACGGTTGCACCTGGATGATCGAA Mapping
0911-11F GACAGGCACAGGACAAGACGG Mapping
0911-11R GCGGGAAGATGAGGCAAGAGT Mapping
50kd-F ATTCCAGGGTCATGACAAGC Positive S-Mo17Rf3Rf3 BAC primer
50KD-R TTGCTCCTCCTGGATTATGG Positive S-Mo17Rf3Rf3 BAC primer
27KD-F ATGAGGGTGTTGCTCGTTGC Positive S-Mo17Rf3Rf3 BAC primer/Southern blot probe
27KD-R ACTCAACTAGCTAGCTAGCC Positive S-Mo17Rf3Rf3 BAC primer/Southern blot probe
+54K-F AGTTGTTGTGCGTCGGAATT Positive S-Mo17Rf3Rf3 BAC primer
+54K-R TGCGTTGCGCTAGGGATA Positive S-Mo17Rf3Rf3 BAC primer
27KD-rtimeF1 TGCCTACAGCCGTCTCG Quantitative RT-PCR
27KD-rtimeR1 GAGGGCAACGAGCAACAC Quantitative RT-PCR
8976-rtimeF1 CTGCACCAACTGTGAAGCAC Quantitative RT-PCR
8976-rtimeR1 CCTCCTCAGAGCACACTTGG Quantitative RT-PCR
3335-rtimeF1 GCAGCTCGAGGATGAGAAGG Quantitative RT-PCR
3335-rtimeR1 ATTGTTGGGAATGGTGGGCT Quantitative RT-PCR
Actin-F GCTACGAGATGCCTGATGGTC Quantitative RT-PCR
Actin-R CCCCCACTGAGGACAACG Quantitative RT-PCR
PbfF1 GTTAGTGTGCCAGACCGTG Reference primer for copy number
PbfR1 GCTTACTGCAAATGAACTCTC Reference primer for copy number
0707-1F TAAAGGCCAGCCATATTCTAAA Insertion primer
0707-1R GGACTAGCTGAATTTCCTGATG Insertion primer
27-F1 ACACCATGAGGGTGTTGCTC SNP primer in 27kd CDS region
27-R1 AGCGGCTATACTACAGCACA SNP primer in 27kd CDS region
150907-2F AGATGTCCAGTGTCGATGGTA Copia
150907-2R ATCCATACAACGAGCAATCAA Copia