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. Author manuscript; available in PMC: 2017 Sep 1.
Published in final edited form as: J Neuroimmune Pharmacol. 2016 May 4;11(3):562–571. doi: 10.1007/s11481-016-9679-4

Table 1.

Primer sequences of immune-related genes used for quantitative RT-PCR analysis in this study

Gene Symbol Gene Name Forward Primer (5′-3′) Reverse Primer (5′-3′)
CASP1 Caspase 1 CCTCAAGTTTTGCCCTTTAGAAAT TGAAAGTCTGTGCTGCAGATAATG
CASP3 Caspase 3 AGGCCGACTTCCTGTATGCTT TGACCCGTCCCTTGAATTTC
CCL2 Chemokine (C-C motif) ligand 2 CCCAAAGAAGCTGTAGTATTTG TCTGGACCCATTCCTTATTG
CCL3 Chemokine (C-C motif) ligand 3 TGAGACCAGCAGCCTTTGCT CAGATCTGCCGGTTTCTCTTG
CCL5 Chemokine (C-C motif) ligand 5 GTCGTCTTTGTCACTCGAAGGA GATGTATTCTTGAACCCACTTCTTCTC
CCL11 Chemokine (C-C motif) ligand 11 TCACGGCCACTTCCTTCAC GGGATCTTCTTACTGGTCATGGTAA
CCR1 Chemokine (C-C motif) receptor 1 GGGACCTTGAACCTTGAATTCATA TGAGTCTGTGTTTCCAGAGTACTTTGT
CCR2 Chemokine (C-C motif) receptor 2 GGTCTGCTACGGGCTCACA CCCGGCGTTTCTGTCTCAT
CCR3 Chemokine (C-C motif) receptor 3 CAGTCCTCGCTATCCA TTTAGCTCTTCCTCTCCTCAT
CCR5 Chemokine (C-C motif) receptor 5 TCATAAAACCAGTGTGAAACAAATTG TCATGTTACCCACAAAACCAAAGA
CX3CL1 Chemokine (C-X3-C motif) ligand 1 CTGGCCGCGTTCTTTCAT TGGCACGTGATGTTGCATTT
CX3CR1 Chemokine (C-X3-C motif) receptor 1 GGGTGAGTGGCTGGCACTT GATCCAATTCCGGGAAGGA
CXCL10 Chemokine (C-X-C motif) ligand 10 GGCCATAGGAAAACTTGAAATCA CTCTTCTCATTGTTCTTTTTCATTGTG
IFNα1 Interferon-α1 CCTGGTGGTGGTGAGCTACTG GCTCTCTTGTTCCTGAGGTTATGAG
IFNαR1 Interferon (α, β and ω) receptor 1 CAGTGCACACATCGCTTCAGA ATTTTATTTGCCACTGTGGTGTTTAT
IFNβ1 Interferon β1, fibroblast GCGTTCCTGCTGTGCTTCTC TGCTAGTGCTTTGTCGGAACTG
IFNγ Interferon γ CATTCATGAGCATCGCCAAGT TCTGATGAGTTCATTGACAGCTTTG
IFNγR1 Interferon γ receptor 1 CCCCTTTCTCCATGATGACAGA GCCGGGACAACTATTGTAAGGA
IL1α Interleukin 1α GCCATAGCCCATGATTTAGAAGA TGCTTGACGATCCTTATCAATTTG
IL1β Interleukin 1β AACAGGCTCATCTGGGATCCT TCAGGGACAGTTGCCATAGCT
IL1R1 Interleukin 1 receptor, type I AAGTGGAATGGGTCGGAAATT TGAAGGGTGTTCCAAAAACTGA
IL1R2 Interleukin 1 receptor, type II TGCACACAGGAAGGGTTTCTG AACCAGCAATCGTCTCCAAGA
IL2 Interleukin 2 TTCATTTTCCAGGCACTGAAGA CCATGATGCTCACGTTTAAATTT
IL4 Interleukin 4 CAGACGTCCTTACGGCAACA TGCGAAGCACCCTGGAA
IL5 Interleukin 5 CCATGAGCACAGTGGTGAAAGA CGTCTCATTGCTCGTCAACAG
IL6 Interleukin 6 GCCCTTCAGGAACAGCTATGA TGTCAACAACATCAGTCCCAAGA
IL6R Interleukin 6 receptor GCCCTTGCTGGTGGATGTT GAGAGGGAGTGCTGCTTGGA
IL8Rα Interleukin 8 receptor, α GGTCTGCTACGGGCTCACA CCCGGCGTTTCTGTCTCAT
IL10 Interleukin 10 CCCTGGGAGAGAAGCTGAAGA CACTGCCTTGCTTTTATTCTCACA
IL10Rα Interleukin 10 receptor, α GCGCACACGGGACAGAAC GCTGGAAAAATCTGGCTTCAA
IL11 Interleukin 11 CTGGATAGCGCTGTCCTCTTG TGTCTCTCATCTGTGCAGCTAGTTG
IL12α Interleukin 12α TCTGGACCTGCCAAGTGTCTT TGGCCGTCCTCACCATGT
IL12β Interleukin 12β AGAGGAGGAGTGTAACCAGAAAGGT CGCCCCTTTGCATTGG
IL13 Interleukin 13 GCAACATCACACAAGACCAGAAG TGTCAGGTCCACGCTCCAT
IL15 Interleukin 15 CCTTCTCAACAGTCACTTCTT ACAGAGGCCAACTGGATA
IL16 Interleukin 16 CCAGTTCCCATCATCGTTAGC CCAAACTTGACGCCTTCCA
IL17β Interleukin 17β AGCTGCAGGCTGACTTAATGG AGATGGAGATGGCAAGAAGGAA
IL18 Interleukin 18 AAACCCGCCTGTGTTCGA TCAGTCTGGTCTGGGATTCGT
IL33 Interleukin 33 CCAAGGAACTTCACTGCTAACAGA GTAACATCCATTCTCCAAAACAAAAC
IRF1 Interferon regulatory factor 1 CATTCCCGGGTACCCTCTGT TCTCTAGCCAGGGTCTCATTCG
IRF2 Interferon regulatory factor 2 AAGGAAACAACGCCTTCAGAGT TTCTCTGTCTTTGGTTTCTTTCCTTT
IRF3 Interferon regulatory factor 3 CTGGCTCAGGAACTGCACTGT CCCAGGTCCAGCTGAGACA
IRF4 Interferon regulatory factor 4 CAGACTGCCGGCTGCATAT CCAGGTTGCTAACATCATAGGTATGT
IRF6 Interferon regulatory factor 6 CATAGAGATTCCAAACGCTTCCA CAAGCCTTAAAAATGGTGTTTTCTT
IRF7 Interferon regulatory factor 7 GCTCTGGAGAACAGGGAAGAAG GTTTGCAACCCAGCATTTCCT
IRF8 Interferon regulatory factor 8 TGGTGACTGGGTATACTGCCTATG TGCCCCCGTAGTAAAAGTTGA
IRF9 Interferon regulatory factor 9 GGAAGGAGCTGGCACAACTG AGGAAGCGGATTCTCCATGA
TGFβ1 Transforming growth factor, β1 AGAAGTCACCCGCGTGCTA TGTGTGATGTCTTTGGTTTTGTCA
TLR4 Toll-like receptor 4 CCCTCATGACATCCCTTATTC CAATTTCTCACAACTTCAGTGG
TNF Tumor necrosis factor (TNF superfamily, member 2) CCTCAGCCTCTTCTCATT GGAACTTCTCCTCCTTGT
TNFRSF1α Tumor necrosis factor receptor superfamily, member 1α TGCCCATCCAAAGAATAATTCC TGGGCTTGGACAGTCACTCA
TNFRSF1β Tumor necrosis factor receptor superfamily, member 1β GCCTAGCCAAACTCCACACATC TCAGTCCAACGATCAGACCAAT