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. 2016 Aug 16;6:31556. doi: 10.1038/srep31556

Table 1. Genome sequencing data for the parents and F2 population used for construction of the ultra-dense SNP map.

Sample name Raw read number Sequencing Depth (×)a Ratio of high-quality reads SNP/InDel number Unique SNP number
Q ≥ 20 Q ≥ 30
Yuzhi DS899 (dt1) (P1) 34,667,944 9.79 95.25% 94.99% 192,744 46,767
JS012 (Dt) (P2) 63,820,640 18.03 91.78% 91.55% 781,528 397,964
120 F2 progeny 4,248,706,712 / 96.10% 91.26% 54,012,159 /
Average 25,405,889 10.00 96.05% 91.29% 450,101 /
Total 4,347,195,296 / / / 54,986,431 /

aThe genome sequencing depth was calculated based on a sesame genome size of 354 Mb, as estimated by K-mer19.