Table III.
Quantitative RT–PCR validation of selected genes.
Gene name | Model | Quantitative RT–PCR fold change | Quantitative RT–PCR direction of change | Microarray fold change | Microarray direction of change |
---|---|---|---|---|---|
PTGS2 | Explants | 7.02 ± 3.34 | ↑ | 24.55 ± 0.45 | ↑ |
Myometrial cells | 2.43 ± 0.65 | ↑ | 2.21 ± 0.41 | ↑ | |
hTERT | 1.73 ± 0.29 | ↑ | 2.47 ± 0.02 | ↑ | |
IL8 | Explants | 200.53 ± 43.89 | ↑ | 28.53 ± 0.45 | ↑ |
Myometrial cells | −4.51 ± 0.07 | ↓ | −1.22 ± 0.14 | ↓ | |
hTERT | 14.26 ± 0.05 | ↑ | 9.92 ± 0.46 | ↑ | |
OXTR | Explants | −11.93 ± 0.05 | ↓ | −1.23 ± 0.21 | ↓ |
Myometrial cells | −34.74 ± 0.01 | ↓ | −7.74 ± 0.42 | ↓ | |
hTERT | −9.09 ± 0.02 | ↓ | −3.31 ± 0.20 | ↓ | |
PGR | Explants | −2.89 ± 0.04 | ↓ | −1.76 ± 0.08 | ↓ |
Myometrial cells | −4.43 ± 0.04 | ↓ | −3.35 ± 0.45 | ↓ | |
hTERT | −18.47 ± 0.00 | ↓ | −8.21 ± 0.08 | ↓ | |
IL1B | Explants | 2.53 ± 0.09 | ↑ | 2.64 ± 0.40 | ↑ |
Myometrial cells | −35.06 ± 0.01 | ↓ | −1.31 ± 0.11 | ↓ | |
hTERT | 18.90 ± 0.80 | ↑ | 18.44 ± 0.36 | ↑ | |
NR3C1 | Explants | −2.19 ± 0.04 | ↓ | 1.39 ± 0.03 | ↑ |
Myometrial cells | −1.64 ± 0.08 | ↓ | 1.28 ± 0.14 | ↑ | |
hTERT | −1.23 ± 0.04 | ↓ | 1.81 ± 0.04 | ↑ | |
TPM1 | Explants | −1.37 ± 0.10 | ↓ | −4.40 ± 0.05 | ↓ |
Myometrial cells | −3.05 ± 0.04 | ↓ | −2.77 ± 0.16 | ↓ | |
hTERT | 1.33 ± 0.06 | ↑ | −1.48 ± 0.08 | ↓ | |
TNFAIP3 | Explants | 4.09 ± 1.30 | ↑ | 6.44 ± 0.19 | ↑ |
Myometrial cells | −13.44 ± 0.01 | ↓ | −5.92 ± 0.12 | ↓ | |
hTERT | −2.99 ± 0.04 | ↓ | −1.08 ± 0.12 | ↓ | |
IL6 | Explants | 20.12 ± 4.27 | ↑ | 15.21 ± 0.21 | ↑ |
Myometrial cells | 1.66 ± 0.46 | ↑ | 2.03 ± 0.31 | ↑ | |
hTERT | 8.32 ± 1.59 | ↑ | 9.47 ± 0.11 | ↑ | |
ACTA2 | Explants | −10.48 ± 0.03 | ↓ | −1.79 ± 0.14 | ↓ |
Myometrial cells | −15.08 ± 0.02 | ↓ | −1.49 ± 0.24 | ↓ | |
hTERT | −44.47 ± 0.00 | ↓ | −2.83 ± 0.07 | ↓ | |
MYLK | Explants | −8.98 ± 0.02 | ↓ | −1.40 ± 0.03 | ↓ |
Myometrial cells | −13.14 ± 0.01 | ↓ | −1.14 ± 0.19 | ↓ | |
hTERT | −124.56 ± 0.00 | ↓ | −3.58 ± 0.06 | ↓ | |
PTGER3 | Explants | −3.59 ± 0.09 | ↓ | −1.10 ± 0.08 | ↓ |
Myometrial cells | −10.37 ± 0.03 | ↓ | −5.57 ± 0.21 | ↓ | |
hTERT | −653.11 ± 0.00 | ↓ | −24.47 ± 0.04 | ↓ | |
GJA1 | Explants | 1.06 ± 0.18 | ↑ | 1.58 ± 0.10 | ↑ |
Myometrial cells | 2.10 ± 0.19 | ↑ | 2.56 ± 0.11 | ↑ | |
hTERT | 1.49 ± 0.11 | ↑ | 1.39 ± 0.03 | ↑ | |
ESR1 | Explants | −1.58 ± 0.10 | ↓ | 1.30 ± 0.17 | ↑ |
Myometrial cells | 1.41 ± 0.23 | ↑ | −1.01 ± 0.13 | ↓ | |
hTERT | −3.56 ± 0.02 | ↓ | −1.32 ± 0.08 | ↓ | |
IL1A | Explants | 3.36 ± 0.83 | ↑ | 2.71 ± 0.35 | ↑ |
Myometrial cells | −1.55 ± 0.04 | ↓ | −1.26 ± 0.10 | ↓ | |
hTERT | 18.24 ± 3.60 | ↑ | 17.09 ± 0.19 | ↑ |
Myometrial tissue obtained from non-labouring women at term was snap frozen at the time Caesarean section (t = 0), finely dissected into 3 × 3 × 3 mm3 explants or digested with a collagenase mixture to isolate the myometrial cells. Explants were left in culture without treatment for 30 h. After overnight incubation with 1% charcoal and dextran-stripped fetal calf serum, the media of myometrial cells at passage 4 and hTERT myometrial cells was refreshed and cells were left in culture for 30 h without treatment. RNA was extracted, cDNA was synthesized and quantitative RT–PCR was performed as described in Methods. Data presented as mean fold change ± SEM; n = 6.