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. 2014 Nov 8;6(12):3252–3266. doi: 10.1093/gbe/evu249

Table 1.

Strains Sequenced in This Study

Coverage
Strain Type Strain Source Location Optical Map 454 Illumina PacBio Total Reference Accession Number(s)
C. insulaenigrae NCTC 12927 Y Marine mammal Scotland Y 107× H; 1,347× N/A 1,454× Foster et al. 2004 CP007770
C. lari concheus LMG 11760 N Human Canada (ONT) Y 71× H; 1,287× N/A 1,358× Debruyne et al. 2009 CP007771
UPTC CCUG 22395 N Human France N 61× H; 1,478× N/A 1,539× N/A CP007776
UPTC NCTC 11845 N River water United Kingdom Y 123× H; 1,048× 182× 1,352× N/A CP007775
UPTC RM16701 N River water United States (CA) N 82× M; 708× N/A 790× N/A CP007777
UPTC RM16712 N River water United States (CA) N 110× M; 551× N/A 661× N/A CP007778
C. peloridis LMG 23910 Y Shellfish The Netherlands Y 63× H; 1,175× 222× 1,459× Debruyne et al. 2009 CP007766CP007767 (pPEL1)CP007768 (pPEL2)
C. subantarcticus LMG 24374 N Gentoo penguin S. Georgia, Antarctica Y 35× H; 1,146× 141× 1,323× Debruyne et al. 2010a CP007772
C. subantarcticus LMG 24377 Y Gray-headed albatross S. Georgia, Antarctica Y 136× H; 1,086× 138× 1,360× Debruyne et al. 2010a CP007773
C. volucris LMG 24379 N Black-headed gull Sweden Y 57× H; 1,381× N/A 1,438× Debruyne et al. 2010b CP007774
Campylobacter spp. RM16704 Na River water United States (CA) N 84× M; 475× 164× 723× N/A CP007769

Note.—H, HiSeq sequencing; M, MiSeq sequencing; N/A, not applicable.

aIf Campylobacter spp. strain RM16704 represents a novel species, then it would likely be designated as the type strain.