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. 2016 Aug 16;10(8):e0004885. doi: 10.1371/journal.pntd.0004885

Fig 5. Linkage disequilibrium heat maps between polymorphic sites for all studied MLST loci (CAP59, GPD1, PLB1, SOD1, IGS1, LAC1 and URA5).

Fig 5

Pairwise D’ metricises are represented by heat colours (Colour Key). Recombination amongst Brazilian VGII strains has been shown, as evidenced amongst four sites (0.7%) in the locus CAP59 and six sites (0.8%) in the locus SOD1 (Fisher’s Exact Test P-value ≤ 0.05).