Table 3.
Number of Genes Related to Oxidative Stress Response
Organism | Total | Upregulated | Downregulated | |
---|---|---|---|---|
Respiratory chain | H. viridissima | 35 | 0 | 29 |
H. vulgaris | 34 | 1 | 0 | |
Peroxidase | H. viridissima | 18 | 2 | 8 |
H. vulgaris | 20 | 3 | 6 | |
Polycystin | H. viridissima | 13 | 5 | 0 |
H. vulgaris | 31 | 1 | 9 | |
Cadherin | H. viridissima | 10 | 5 | 0 |
H. vulgaris | 13 | 0 | 8 | |
Caspase | H. viridissima | 12 | 3 | 0 |
H. vulgaris | 20 | 7 | 1 | |
Metalloproteinase | H. viridissima | 5 | 1 | 2 |
H. vulgaris | 6 | 3 | 1 |
Upregulated; significantly (FDR ≤ 0.1) upregulated in symbiotic state. Downregulated; significantly (FDR ≤ 0.1). We selected the genes that are annotated both in Uniprot and NCBI-NR (E-value < =1e−5).