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. Author manuscript; available in PMC: 2016 Aug 16.
Published in final edited form as: RNA Dis. 2016 Jun 6;3(2):e1336. doi: 10.14800/rd.1336

Figure 4. Graphical representation at scale of REH2 orthologs in kinetoplastids.

Figure 4

Domain hits were identified in NCBI’s interface CD-searches [48]. The CD-search detected a N-terminal dsRBD only in the T. cruzi protein, and an OB-fold in some of the proteins. Three-dimensional structure predictions (*) from the Phyre2 server [47] identified a N-terminal dsRBD and a OB-fold with high confidence in all orthologs. In the Leishmania orthologs, only part of a typical dsRBD was detected. The IDs and sequences of the examined proteins were obtained from the kinetoplastid genome resource TriTrypDB [53]. The species and ID are given as follows: T. cruzi (TcCLB.511003.30 or XP_8160321), L. major (LmjF.34.3230), L. braziliensis (XP_001564561), C. fasciculata (CFAC1_290061800 ) and E. monterogeii (EMOLV88_340032900). Also indicated are the number of amino acids in each protein and the DEAH family defining residues in motif II.