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. Author manuscript; available in PMC: 2016 Aug 16.
Published in final edited form as: RNA Dis. 2016 Jun 6;3(2):e1336. doi: 10.14800/rd.1336

Figure 7. Domain organization at scale of known zinc finger cofactors of DEAH-RHA proteins.

Figure 7

Domain annotations in NCBI’s CD-search predictions. Identification of the zinc fingers in H2F1 is described in Fig. 6. The domains in MEP1 (Q21502 - MEP1_CAEEL) are not detected in a CD-search analysis but are annotated in UniProtKB. Predicted Znf domains in ZAP isoform 1 (Q7Z2W4 (ZCCHV_HUMAN) are not detected in a CD-search analysis but are annotated in UniProtKB and were identified in a crystal structure of the N-terminal fragment in a homolog protein [16]. Detected conserved domains are WWE (smart00678) and PARP (pfam00644).