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. 2016 Aug 17;7:1225. doi: 10.3389/fpls.2016.01225

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Copyright © 2016 Schandry, de Lange, Prior and Lahaye.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Inter-repeat comparisons of RipTALs from closely related Rssc strains uncovers position-dependent conservation (PDC) of repeats. Individual repeats were aligned and pairwise identities were calculated. Repeats are shown in their native order. Cells are color coded by their percentage identities value according to the color code to the right. Identities <97% are displayed in white font, those ≥97% in black font. Numbers indicate the position of the repeat within the CRD. (A) Comparison between all repeats of the CRD of ripTALI-1 (columns) versus all repeats of the CRD of ripTALI-8 (rows). (B) Comparison between all repeats of the CRD of ripTALIII-1 (columns) versus all repeats of the CRD of ripTALII-1 (rows).