Figure 2.

Cytoscape interaction maps of significantly enriched gene ontology terms in the (A) perilesional cortex and (B) ipsilateral thalamus at 3 months after traumatic brain injury (TBI). Interaction map from the cortex highlighted upregulation of immunity and inflammatory gene sets, and downregulation of an ion channel gene set. The same gene sets were also highlighted in the thalamus, which had enriched downregulated mitochondrion-related gene sets. Color codes: upregulated gene sets are shown in red and downregulated gene sets are shown in blue.