Table 1. Q3/Q8 accuracy of secondary structure prediction on CASP and CAMEO targets.

Methods	Q3 (%)		Q8 (%)
	CASP	CAMEO	CASP	CAMEO
PSIPREDa	71.3	70.5	–	–
PSIPREDp	80.9	80.1	–	–
JPREDp	81.0	79.7	–	–
SSprop	78.0	77.5	65.3	63.5
SSproT	82.3	78.9	71.8	65.7
RaptorX-Propertya	74.4	73.2	60.2	58.6
RaptorX-Propertyp	84.6	84.4	72.0	72.1

In Tables 1–3, ‘a’, ‘p’ and ‘T’ denote ‘sequence profile not used’, ‘sequence profile used’ and ‘template used’, respectively.