Table 1.
CL libraries | SL libraries | LL libraries | |||||||
---|---|---|---|---|---|---|---|---|---|
Raw reads | 12,029,234 | 12,029,235 | 12,029,236 | 12,029,235 | 12,029,236 | 12,029,237 | 12,029,236 | 12,029,237 | 12,029,238 |
Clean reads | 11,467,477 (95.33%) | 19,100,426 (96.21%) | 11,189,160 (95.93%) | 10,725,686 (95.44%) | 11,100,606 (95.72%) | 10,709,428 (95.95%) | 10,725,686 (88.16%) | 11,100,606 (97.36%) | 10,709,428 (97.53%) |
Length filtered unique reads | 3,682,803 | 9,822,040 | 5,256,958 | 5,693,030 | 5,296,579 | 5,838,757 | 5,440,543 | 3,799,492 | 6,631,398 |
Mapped unique reads | 2,427,929 (65.93%) | 4,861,430 (49.50%) | 2,986,411 (56.81%) | 3,317,955 (58.28%) | 3,200,469 (60.43%) | 3,504,719 (60.03%) | 3,148,652 (57.87%) | 1,966,000 (51.74%) | 3,553,027 (53.58%) |
“+” Mapped unique reads | 2,202,965 (59.82%) | 4,212,799 (42.89%) | 2,446,345 (46.54%) | 2,784,750 (48.92%) | 2,711,778 (51.20%) | 3,036,658 (52.01%) | 2,682,254 (49.30%) | 1,628,852 (42.87%) | 3,050,045 (45.99%) |
“−” Mapped unique reads | 224,964 (6.11%) | 648,631 (6.60%) | 540,066 (10.27%) | 533,205 (9.37%) | 488,691 (9.23%) | 468,061 (8.02%) | 466,398 (8.57%) | 337,148 (8.87%) | 502,982 (7.58%) |