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. 2016 Aug 17;11(8):e0161118. doi: 10.1371/journal.pone.0161118

Table 1. Values for sequence reads, Operational Taxonomic Units (OTUs), phyla and diversity indices for bacterial and fungal gut communities of P. endroedyi and P. striatum individuals.

Individual Number of reads Number of OTUs Phyla Singletons Chao Invsimpson Shannon Coverage
Bacterial 16S rRNA gene P. endroedyi 1 2120 213 10 105 244.61 19.01 3.88 0.97
Bacterial 16S rRNA gene P. endroedyi 2 1718 258 11 133 282.34 81.00 4.91 0.97
Bacterial 16S rRNA gene P. endroedyi 3 462 97 11 42 112.62 21.47 3.82 0.94
Bacterial 16S rRNA gene P. endroedyi 4 2175 271 6 177 287.59 62.44 4.80 0.98
Bacterial 16S rRNA gene P. endroedyi 5 2817 317 9 193 335.83 60.13 4.83 0.98
Bacterial 16S rRNA gene P. striatum 1 10106 157 4 84 174.53 8.77 2.82 1.00
Bacterial 16S rRNA gene P. striatum 2 4901 158 4 87 194.96 16.64 3.38 0.99
Bacterial 16S rRNA gene P. striatum 3 4208 140 6 51 183.05 8.36 2.88 0.99
Bacterial 16S rRNA gene P. striatum 4 3911 119 4 71 125.84 8.12 2.93 1.00
Bacterial 16S rRNA gene P. striatum 5 6620 172 5 100 201.29 13.36 3.32 0.99
Fungal ITS gene region P. striatum 1 136 88 1 156 179.50 96.63 4.29 0.55
Fungal ITS gene region P. striatum 2 939 202 2 602 222.81 51.93 4.56 0.94
Fungal ITS gene region P. striatum 3 199 106 2 223 248.38 88.35 4.40 0.66
Fungal ITS gene region P. striatum 4 107 70 2 153 157.50 65.94 4.04 0.53
Fungal ITS gene region P. striatum 5 111 63 2 146 134.75 52.18 3.88 0.62