Table 1. Values for sequence reads, Operational Taxonomic Units (OTUs), phyla and diversity indices for bacterial and fungal gut communities of P. endroedyi and P. striatum individuals.
Individual | Number of reads | Number of OTUs | Phyla | Singletons | Chao | Invsimpson | Shannon | Coverage | |
---|---|---|---|---|---|---|---|---|---|
Bacterial 16S rRNA gene | P. endroedyi 1 | 2120 | 213 | 10 | 105 | 244.61 | 19.01 | 3.88 | 0.97 |
Bacterial 16S rRNA gene | P. endroedyi 2 | 1718 | 258 | 11 | 133 | 282.34 | 81.00 | 4.91 | 0.97 |
Bacterial 16S rRNA gene | P. endroedyi 3 | 462 | 97 | 11 | 42 | 112.62 | 21.47 | 3.82 | 0.94 |
Bacterial 16S rRNA gene | P. endroedyi 4 | 2175 | 271 | 6 | 177 | 287.59 | 62.44 | 4.80 | 0.98 |
Bacterial 16S rRNA gene | P. endroedyi 5 | 2817 | 317 | 9 | 193 | 335.83 | 60.13 | 4.83 | 0.98 |
Bacterial 16S rRNA gene | P. striatum 1 | 10106 | 157 | 4 | 84 | 174.53 | 8.77 | 2.82 | 1.00 |
Bacterial 16S rRNA gene | P. striatum 2 | 4901 | 158 | 4 | 87 | 194.96 | 16.64 | 3.38 | 0.99 |
Bacterial 16S rRNA gene | P. striatum 3 | 4208 | 140 | 6 | 51 | 183.05 | 8.36 | 2.88 | 0.99 |
Bacterial 16S rRNA gene | P. striatum 4 | 3911 | 119 | 4 | 71 | 125.84 | 8.12 | 2.93 | 1.00 |
Bacterial 16S rRNA gene | P. striatum 5 | 6620 | 172 | 5 | 100 | 201.29 | 13.36 | 3.32 | 0.99 |
Fungal ITS gene region | P. striatum 1 | 136 | 88 | 1 | 156 | 179.50 | 96.63 | 4.29 | 0.55 |
Fungal ITS gene region | P. striatum 2 | 939 | 202 | 2 | 602 | 222.81 | 51.93 | 4.56 | 0.94 |
Fungal ITS gene region | P. striatum 3 | 199 | 106 | 2 | 223 | 248.38 | 88.35 | 4.40 | 0.66 |
Fungal ITS gene region | P. striatum 4 | 107 | 70 | 2 | 153 | 157.50 | 65.94 | 4.04 | 0.53 |
Fungal ITS gene region | P. striatum 5 | 111 | 63 | 2 | 146 | 134.75 | 52.18 | 3.88 | 0.62 |