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. Author manuscript; available in PMC: 2016 Aug 17.
Published in final edited form as: J Biomed Inform. 2015 Jun 26;58(Suppl):S111–S119. doi: 10.1016/j.jbi.2015.06.010

Table 5.

Official submission results, sorted by micro-F1, including our two submissions, aggregate results, and other top submissions.

System Micro Macro
P R F1 P R F1
NLM Run #2 (1st) 0.8951 0.9625 0.9276 0.8965 0.9611 0.9277
Harbin (2nd) 0.9106 0.9436 0.9268 0.9119 0.9399 0.9257
Kaiser Permanente (3rd) 0.8972 0.9409 0.9185 0.8998 0.9429 0.9209
Linguamatics (4th) 0.8975 0.9375 0.9171 0.8989 0.9361 0.9171
NLM Run #1 0.8702 0.9694 0.9171 0.8694 0.9682 0.9162
Nottingham (5th) 0.8847 0.9488 0.9156 0.8885 0.9411 0.9141
Median 0.852 0.908 0.872 0.849 0.904 0.870
Mean 0.808 0.835 0.815 0.800 0.834 0.812
Min 0.455 0.203 0.305 0.455 0.258 0.365