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. Author manuscript; available in PMC: 2017 Oct 1.
Published in final edited form as: Biochim Biophys Acta. 2016 May 11;1864(10):1455–1463. doi: 10.1016/j.bbapap.2016.05.005

Table 2.

Predictions of disorder and binding regions

Protein
name
(residues)		 Residues predicted to be
intrinsically disordered		 Predicted binding region of
IDR		 Predicted
secondary
structure
(Jpred4)
IsUnstruct PONDR
-FIT		 IUPRED Anchor DisoRDPbind
(predicted
binding partner)
Known MoRFs; contain Anchor regions
TRAP220
(637-654)		 637-654 637-654 637-654 637-654 None α: 643-648
BECN1
(105-130)		 105-114 105-109 105,
108-112,
124, 128		 117-127 None α: 111-124
GRIM
(1-15)		 1-3, 9-15 1-15 None 1-15 1-15 (RNA)
4-15 (protein)		 α: 10-15
p53
(367-388)		 367-388 None 367-388 367-388 360-383
(DNA)		 None
IDRs with unidentified binding partners; contain Anchor regions
GOPC
(248-277)		 258-277 248-277 255-277 248-257 269, 272-277
(DNA)		 β: 251-254
ATG3
(129-158)		 137-158 129-158 139-158 136-143 139-158 (protein) None
ATG9A
(810-839)		 810-839 810-839 810-839 831-839 819, 821, 833-839
(protein)		 None
BECN1
(76-105)		 76-105 76-105 76-105 79-103 60-84 (protein) None
AMBRA1
(527-541)		 527-541 527-541 527-541 530-538 527-541 (protein) α: 527-535
IDRs with unidentified binding partners; lack Anchor regions
GOPC
(255-279)		 258-279 255-279 255-279 None 269, 272-279
(DNA)		 None
BECN1
(50-78)		 50-78 50-78 50-78 None 59-78 (protein) None
ATG16L1
(59-84)		 59-84 None 59-84 None None α: 65-66,
80-84
ATG2A
(1244-
1273)		 1244-1273 1244-
1273		 1244-
1273		 None 1257-1260
(protein)		 None