Table 4.
Secondary structure content in known MoRFs
Protein (residues in peptide) |
GRIM (1-15) |
TRAP220 (637-654) |
BECN1 (105-130) |
p53 (367-388) |
|
---|---|---|---|---|---|
Type of MoRF | β-MoRF | α-MoRF | α-MoRF | α- & β- MoRF | |
Average estimated secondary structure content (%) | |||||
Helix (%) |
No TFE | 0 ± 1 | 7 ± 3 | 2 ± 1 | 6 ± 4 |
25% TFE | 0 ± 4 | 62 ± 10 | 48 ± 2 | 34 ± 10 | |
40% TFE | 7 ± 7 | 50 ± 3 | 55 ± 2 | 31 ± 1 | |
Strand (%) |
No TFE | 9 ± 8 | 29 ± 5 | 28 ± 7 | 31 ± 2 |
25% TFE | 19 ± 14 | 6 ± 3 | 12 ± 1 | 12 ± 4 | |
40% TFE | 22 ± 16 | 7 ± 6 | 8 ± 1 | 18 ± 2 | |
Coil (%) |
No TFE | 89 ± 7 | 62 ± 6 | 65 ± 6 | 63 ± 2 |
25% TFE | 72 ± 7 | 32 ± 11 | 40 ± 2 | 54 ± 7 | |
40% TFE | 70 ± 20 | 43 ± 10 | 36 ± 2 | 50 ± 4 |