Table 1.
Table represents the preservation statistics of modules from reference (R. serpentina) and test (C. roseus) networks.
S. No. | Modules | Module size | Zsummary score | Correlation of kME values (All-module genes) | Correlation of kME values (in-module genes) |
---|---|---|---|---|---|
1 | Turquoise | 200 | 6.6945826 | [0.36, 1.2e–27] | [0.4, 5e–13] |
2 | Gold | 50 | 2.8849298 | – | – |
3 | Black | 51 | 1.7958002 | [0.18, 1.1e–07] | [0.11, 0.44] |
4 | Gray | 83 | 1.4699666 | [0.23, 9.2e–12] | [−0.29, 0.0078] |
5 | Brown | 88 | 0.8751528 | [0.28, 6.4e–17] | [−0.13, 0.23] |
6 | Yellow | 73 | 0.6934353 | [0.28, 6.4e–17] | [−0.079, 0.51] |
7 | Green | 67 | 0.5611602 | [0.24, 1e–12] | [0.24, 0.05] |
8 | Red | 61 | 0.5386991 | [0.34, 1.2e–24] | [−0.11, 0.4] |
9 | Blue | 133 | −0.9531561 | [−0.016, 0.64] | [−0.029, 0.74] |
Module membership (kME) of the genes from each module were compared and computed for their correlation. Modules which are having a high correlation with significant p-value are highly preserved. Where, all- and in-module genes include the correlation of all genes in module and subset of genes, respectively, to display hub-gene conservation.