Table 1. Descriptive summary of non-coding RNAs reads.
IDa | Raw Reads | Clean reads | Percent (%)b | Annotated reads | Perfect matchesc | Reads Annotatedin in miRBase21.0 (Gallus gallus) | Reads Perfect matches in miRBase21.0 (Gallus gallus) |
---|---|---|---|---|---|---|---|
L20-1 | 20,905,809 | 20,300,052 | 97.1% | 17,392,373 | 14,041,252 | 12,170,502 | 10,089,552 |
L20-2 | 27,180,553 | 26,552,542 | 97.7% | 22,368,399 | 17,966,690 | 15,306,101 | 12,614,600 |
L20-3 | 14,913,255 | 14,540,987 | 97.5% | 11,482,606 | 9,233,371 | 7,377,736 | 6,131,583 |
L30-1 | 20,677,403 | 19,561,788 | 94.6% | 14,870,023 | 11,687,333 | 9,079,113 | 7,804,188 |
L30-2 | 15,124,850 | 13,450,426 | 88.9% | 7,916,715 | 6,298,661 | 4,594,483 | 4,070,144 |
L30-3 | 21,846,238 | 21,273,115 | 97.4% | 10,503,394 | 7,951,605 | 3,972,398 | 3,431,075 |
aL20, liver samples from 20-week-old layer hens; L30, liver samples from 30-week-old layer hens.
bPercent, clean reads/raw reads.
cPerfect matches, reads that matched the reference genome completely.