Table 2. Diversity estimates of the microbial communities at different locations and units at investigated waterworks.
Water works | Unit | Zone | Number of sequencesa | Observed OTUsb |
Richness estimates |
Evenness | Diversity | ||
---|---|---|---|---|---|---|---|---|---|
Singleton OTUs0.03s | Chao1 | ACE | GiniCoff | H | |||||
DWTP1 | GW | 6758 | 372 | 192 | 1005 | 890 | 0.841 | 8.5±0.02 | |
PF | Top | 12 050±2396 | 322±4 | 175±3 | 546±81 | 641±99 | 0.890±0.01 | 4.1±0.18 | |
Depth | 12 414±3826 | 361±10 | 193±34 | 604±130 | 742±159 | 0.881±0.01 | 4.2±0.24 | ||
AF | Top | 13 908±787 | 439±66 | 257±56 | 779±130 | 909±161 | 0.862±0.01 | 4.8±0.17 | |
Depth | 14 361±1988 | 497±69 | 296±47 | 959±155 | 1100±178 | 0.855±0.01 | 4.8±0.40 | ||
DWTP2 | GW | 6392 | 1105 | 772 | 3046 | 3352 | 0.683 | 6.1±0.03 | |
PF | Top | 7738±553 | 393±47 | 284±31 | 1142±182 | 1337±182 | 0.895±0.01 | 4.3±0.20 | |
Depth | 7113±622 | 406±30 | 286±26 | 1406±59 | 1410±97 | 0.888±0.01 | 4.5±0.05 | ||
AF | Top | 9869±3891 | 512±45 | 340±49 | 1361±362 | 1525±330 | 0.862±0.01 | 4.6±0.09 | |
Depth | 11 757±4330 | 480±62 | 301±71 | 1275±473 | 1371±505 | 0.868±0.01 | 4.5±0.02 | ||
DWTP3 | GW | 18746 | 863 | 527 | 1695 | 1895 | 0.775 | 6.8±0.04 | |
PF | Top | 6803±1332 | 470±69 | 343±55 | 1639±302 | 1719±336 | 0.929±0.01 | 3.1±0.60 | |
Depth | 6988±751 | 564±50 | 427±58 | 1893±233 | 2241±401 | 0.879±0.04 | 3.3±0.43 | ||
AF | Top | 6406±1228 | 802±81 | 589±79 | 2694±494 | 3008±520 | 0.721±0.03 | 7.6±0.01 | |
Depth | 6803±1332 | 784±105 | 590±114 | 2580±591 | 2973±708 | 0.716±0.03 | 7.5±0.41 | ||
DWTP4 | GW | 16 480 | 1169 | 676 | 2170 | 2373 | 0.667 | 8.6±0.03 | |
PF | Top | 6397±930 | 239±45 | 161±39 | 750±202 | 770±296 | 0.879±0.01 | 4.0±0.37 | |
Depth | 7498±888 | 357±42 | 258±34 | 1222±165 | 1311±236 | 0.852±0.01 | 4.6±0.26 | ||
AF | Top | 6880±952 | 1106±192 | 850±184 | 4368±1194 | 4932±1526 | 0.784±0.02 | 6.4±0.08 | |
Depth | 6390±782 | 1104±176 | 844±164 | 4599±1715 | 5013±1689 | 0.792±0.01 | 6.3±0.47 | ||
DWTP5 | GW | 16 648 | 962 | 593 | 1808 | 2183 | 0.735 | 7.5±0.03 | |
AF | Top | 8084±740 | 343±68 | 241±45 | 1131±317 | 1233±354 | 0.909±0.01 | 3.4±0.36 | |
Depth | 7650±1026 | 562±181 | 422±142 | 1913±742 | 2136±853 | 0.859±0.04 | 4.6±1.02 |
Abbreviations: ACE, abundance-based coverage estimator; AF, after-filter; DWTP, drinking water treatment plant; Gcoff, Gini coefficient; GW, groundwater; H, shannon index; OTU, operational taxonomic unit; PF, prefilter.
All sample sizes were equalized at 4000 sequences. Standard deviations (±) were obtained from biological replicates; standard deviations in the top and bottom layers were assessed from triplicate samples from the same filter. GW samples were taken as individual samples.
Numbers of sequences in PF and AF rows show the total amount of high-quality sequences that were obtained from 10 ng of DNA extracted from 0.5 g of drained wet sand grains. Mean values were calculated by grouping the samples according to zones, units and waterworks.
OTU calculations were carried out at 97% phylogenetic similarity.