Table 2. Genes of the secondary metabolism in leaf nodule symbionts.
| Putative product | Ca. B. kirkii | Ca. B. punctata | Ca. B. pumila | Ca. B. humilis | Ca. B. schumanniana | Ca. B. verschuerenii | Ca. B. umbellata | Ca. B. brachyanthoides |
|---|---|---|---|---|---|---|---|---|
| 2-epi-5-epi-valiolone synthase (Bkir_c149_4879) | Ψ | |||||||
| N-acetylmannosamine kinase (Bkir_c149_4878) | ||||||||
| Aminosugar transaminase (Bkir_c149_4877) | Ψ | |||||||
| Glycoside hydrolase (Bkir_c149_4876) | ||||||||
| Sugar dehydrogenase (Bkir_c149_4875) | ||||||||
| HAD family hydrolase (Bkir_c149_4874) | ||||||||
| Sugar phosphate isomerase (Bkir_c149_4873) | Ψ | |||||||
| Acetyltransferase, GNAT family (Bkir_c149_4873) | ||||||||
| Dioxygenase (Bkir_c48_3583) | ||||||||
| Methyltransferase (Bkir_c48_3584) | ||||||||
| C7-cyclitol-7-kinase (Bkir_c48_3591) | ||||||||
| 3-dehydroquinate synthase (Bkir_c48_3593) | ||||||||
| dTDP-4-dehydrorhamnose reductase (Bkir_c48_3594) | ||||||||
| NUDIX family hydrolase (Bkir_c48_3606) | ||||||||
| Kirkamide | + | + | + | + | − | + | − | − |
Genes of Ca. B. kirkii are used as a reference. Functional homologues are highlighted in grey and pseudogenes indicated by Ψ. Conserved genes are shown in bold. Detection of kirkamide in crude leaf extracts is indicated by a + symbol. A − symbol indicates kirkamide concentrations below detection levels (see Materials and Methods).