Skip to main content
. 2016 Mar 15;10(9):2092–2105. doi: 10.1038/ismej.2016.27

Table 2. Genes of the secondary metabolism in leaf nodule symbionts.

Putative product Ca. B. kirkii Ca. B. punctata Ca. B. pumila Ca. B. humilis Ca. B. schumanniana Ca. B. verschuerenii Ca. B. umbellata Ca. B. brachyanthoides
2-epi-5-epi-valiolone synthase (Bkir_c149_4879)               Ψ
N-acetylmannosamine kinase (Bkir_c149_4878)                
Aminosugar transaminase (Bkir_c149_4877)       Ψ        
Glycoside hydrolase (Bkir_c149_4876)                
Sugar dehydrogenase (Bkir_c149_4875)                
HAD family hydrolase (Bkir_c149_4874)                
Sugar phosphate isomerase (Bkir_c149_4873)       Ψ        
Acetyltransferase, GNAT family (Bkir_c149_4873)                
Dioxygenase (Bkir_c48_3583)                
Methyltransferase (Bkir_c48_3584)                
C7-cyclitol-7-kinase (Bkir_c48_3591)                
3-dehydroquinate synthase (Bkir_c48_3593)                
dTDP-4-dehydrorhamnose reductase (Bkir_c48_3594)                
NUDIX family hydrolase (Bkir_c48_3606)                
Kirkamide + + + + +

Genes of Ca. B. kirkii are used as a reference. Functional homologues are highlighted in grey and pseudogenes indicated by Ψ. Conserved genes are shown in bold. Detection of kirkamide in crude leaf extracts is indicated by a + symbol. A − symbol indicates kirkamide concentrations below detection levels (see Materials and Methods).