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. 2016 Aug 19;6:83. doi: 10.3389/fcimb.2016.00083

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Copyright © 2016 Warrier, Walter, Frangoulidis, Raghavan, Hicks and Minnick.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Multiple sequence alignment of the 5′ region of C. burnetii's IVS. Corresponding sequences of selected C. burnetii strains (shown on the left; see Table S2) were aligned using ClustalX. Bases in the gray box represent a potential SD region. Arrows indicate direct heptameric repeats, while a dashed line shows deletion of one of the repeats. ATG (in bold) represents the start codon of the S23p ORF, as predicted by Afseth et al. (1995). An asterisk indicates perfect nucleotide sequence identity in the alignment. The arrowhead indicates the RNase III 5′ processing site.